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L1_008_000M1_scaffold_936

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Displaying items 1-30 of 51 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_936_1
Clostridium sp. CAG:343, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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447..1751
DNA (1305bp) protein (435aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:343 RepID=R6NDE6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC06349.1}; TaxID=1262796 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:343.;"
L1_008_000M1_scaffold_936_2
Clostridium sp. CAG:343, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1768..2358
DNA (591bp) protein (197aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:343 RepID=R6N5L6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC06350.1}; TaxID=1262796 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:343.;"
flavin reductase
L1_008_000M1_scaffold_936_3
Clostridium sp. CAG:343, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


2477..2641
DNA (165bp) protein (55aa)
50S ribosomal protein L33 n=1 Tax=Clostridium sp. CAG:343 RepID=R6NJD0_9CLOT
50S ribosomal protein L33 {ECO:0000256|HAMAP-Rule:MF_00294}; TaxID=1262796 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:343.;"
rpmG; 50S ribosomal protein L33
L1_008_000M1_scaffold_936_4
Clostridium sp. CAG:343, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2672..3043
DNA (372bp) protein (124aa)
Protein translocase subunit SecE n=1 Tax=Clostridium sp. CAG:343 RepID=R6P8X5_9CLOT
Protein translocase subunit SecE {ECO:0000256|HAMAP-Rule:MF_00422}; TaxID=1262796 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:343.;"
preprotein translocase subunit SecE
L1_008_000M1_scaffold_936_5
Clostridium sp. CAG:343, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3071..3607
DNA (537bp) protein (179aa)
Transcription termination/antitermination protein NusG n=1 Tax=Clostridium sp. CAG:343 RepID=R6N2X5_9CLOT
Transcription termination/antitermination protein NusG {ECO:0000256|HAMAP-Rule:MF_00948, ECO:0000256|SAAS:SAAS00078489}; TaxID=1262796 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:343.;"
nusG; transcription antitermination protein NusG
L1_008_000M1_scaffold_936_6
Clostridium sp. CAG:343, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


3628..4056
DNA (429bp) protein (143aa)
50S ribosomal protein L11 n=1 Tax=Clostridium sp. CAG:343 RepID=R6NDF2_9CLOT
50S ribosomal protein L11 {ECO:0000256|HAMAP-Rule:MF_00736}; TaxID=1262796 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:343.;"
50S ribosomal protein L11
L1_008_000M1_scaffold_936_7
Clostridium sp. CAG:343, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


4138..4824
DNA (687bp) protein (229aa)
50S ribosomal protein L1 n=1 Tax=Clostridium sp. CAG:343 RepID=R6N5M1_9CLOT
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318}; TaxID=1262796 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:343.;"
rplA; 50S ribosomal protein L1
L1_008_000M1_scaffold_936_8
Clostridium sp. CAG:343, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


4998..5558
DNA (561bp) protein (187aa)
50S ribosomal protein L10 n=1 Tax=Clostridium sp. CAG:343 RepID=R6NJD6_9CLOT
50S ribosomal protein L10 {ECO:0000256|HAMAP-Rule:MF_00362, ECO:0000256|RuleBase:RU003636}; TaxID=1262796 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:343.;"
rplJ; 50S ribosomal protein L10
L1_008_000M1_scaffold_936_9
Clostridium sp. CAG:440, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


5656..6024
DNA (369bp) protein (123aa)
50S ribosomal protein L7/L12 n=1 Tax=Clostridium sp. CAG:440 RepID=R7GD51_9CLOT
50S ribosomal protein L7/L12 {ECO:0000256|HAMAP-Rule:MF_00368}; TaxID=1262807 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:440.;"
rplL; 50S ribosomal protein L7/L12
L1_008_000M1_scaffold_936_10
Clostridium sp. CAG:343, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6139..6423
DNA (285bp) protein (95aa)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C {ECO:0000256|HAMAP-Rule:MF_00122}; Short=Asp/Glu-ADT subunit C {ECO:0000256|HAMAP-Rule:MF_00122};; EC=6.3.5.- {ECO:0000256|HAMAP-Rule:MF_00122};; TaxID=1262796 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:343.;"
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C n=1 Tax=Clostridium sp. CAG:343 RepID=R6P8Y1_9CLOT
glutamyl-tRNA(Gln) amidotransferase subunit C
L1_008_000M1_scaffold_936_11
Clostridium sp. CAG:343, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6525..7124
DNA (600bp) protein (200aa)
HAD superfamily hydrolase n=1 Tax=Clostridium sp. CAG:343 RepID=R6N2Y1_9CLOT
HAD superfamily hydrolase {ECO:0000313|EMBL:CDC06358.1}; TaxID=1262796 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:343.;"
L1_008_000M1_scaffold_936_12
Clostridium sp. CAG:343, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7124..8587
DNA (1464bp) protein (488aa)
Glutamyl-tRNA(Gln) amidotransferase subunit A {ECO:0000256|HAMAP-Rule:MF_00120}; Short=Glu-ADT subunit A {ECO:0000256|HAMAP-Rule:MF_00120};; EC=6.3.5.7 {ECO:0000256|HAMAP-Rule:MF_00120};; TaxID=1262796 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:343.;"
glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase subunit A (EC:6.3.5.-)
Glutamyl-tRNA(Gln) amidotransferase subunit A n=1 Tax=Clostridium sp. CAG:343 RepID=R6NDF6_9CLOT
L1_008_000M1_scaffold_936_13
Clostridium sp. CAG:343, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8725..10164
DNA (1440bp) protein (480aa)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B {ECO:0000256|HAMAP-Rule:MF_00121, ECO:0000256|SAAS:SAAS00247567}; Short=Asp/Glu-ADT subunit B {ECO:0000256|HAMAP-Rule:MF_00121};; EC=6.3.5.- {ECO:0000256|HAMAP-Rule:MF_00121};; TaxID=1262796 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:343.;"
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B n=1 Tax=Clostridium sp. CAG:343 RepID=R6N5M6_9CLOT
glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase subunit B
L1_008_000M1_scaffold_936_14
Clostridium sp. CAG:343, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10200..10451)
DNA (252bp) protein (84aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:343 RepID=R6NJE0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC06361.1}; TaxID=1262796 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:343.;"
L1_008_000M1_scaffold_936_15
Clostridium sp. CAG:343, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(10615..10881)
DNA (267bp) protein (89aa)
30S ribosomal protein S20 n=1 Tax=Clostridium sp. CAG:343 RepID=R6P8Y6_9CLOT
30S ribosomal protein S20 {ECO:0000256|HAMAP-Rule:MF_00500}; TaxID=1262796 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:343.;"
rpsT; ribosomal protein S20
L1_008_000M1_scaffold_936_16
Clostridium sp. CAG:343, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11037..11483
DNA (447bp) protein (149aa)
ribose-5-phosphate isomerase (EC:5.3.1.6)
Ribose-5-phosphate isomerase n=1 Tax=Clostridium sp. CAG:343 RepID=R6N2Y6_9CLOT
Ribose-5-phosphate isomerase {ECO:0000313|EMBL:CDC06363.1}; TaxID=1262796 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:343.;"
L1_008_000M1_scaffold_936_17
Clostridium sp. CAG:343, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11497..12732
DNA (1236bp) protein (412aa)
Glycosyl transferase family 4 n=1 Tax=Clostridium sp. CAG:343 RepID=R6NDG1_9CLOT
Glycosyl transferase family 4 {ECO:0000313|EMBL:CDC06364.1}; TaxID=1262796 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:343.;"
UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase
L1_008_000M1_scaffold_936_18
Clostridium sp. CAG:343, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12784..13665
DNA (882bp) protein (294aa)
33 kDa chaperonin n=1 Tax=Clostridium sp. CAG:343 RepID=R6N5N1_9CLOT
33 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00117, ECO:0000256|SAAS:SAAS00038673}; Heat shock protein 33 homolog {ECO:0000256|HAMAP-Rule:MF_00117}; TaxID=1262796 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:343.;"
disulfide bond chaperone
L1_008_000M1_scaffold_936_19
Clostridium sp. CAG:343, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13733..14659
DNA (927bp) protein (309aa)
Inorganic pyrophosphatase PpaC n=1 Tax=Clostridium sp. CAG:343 RepID=R6NJE5_9CLOT
Inorganic pyrophosphatase PpaC {ECO:0000313|EMBL:CDC06366.1}; TaxID=1262796 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:343.;"
ppaC; manganese-dependent inorganic pyrophosphatase PpaC
L1_008_000M1_scaffold_936_20
Clostridium sp. CAG:343, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14841..15113
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:343 RepID=R6P8Z2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC06367.1}; TaxID=1262796 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:343.;"
Membrane protein involved in the export of O-antigen and teichoic acid
L1_008_000M1_scaffold_936_21
Clostridium sp. CAG:343, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15181..16476
DNA (1296bp) protein (432aa)
Stage V sporulation protein B n=1 Tax=Clostridium sp. CAG:343 RepID=R6N2Z1_9CLOT
Stage V sporulation protein B {ECO:0000313|EMBL:CDC06368.1}; TaxID=1262796 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:343.;"
stage V sporulation protein B
L1_008_000M1_scaffold_936_22
Clostridium sp. CAG:343, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16594..16872
DNA (279bp) protein (93aa)
Bacterial nucleoid DNA-binding protein n=1 Tax=Clostridium sp. CAG:343 RepID=R6NDG6_9CLOT
Bacterial nucleoid DNA-binding protein {ECO:0000313|EMBL:CDC06369.1}; TaxID=1262796 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:343.;"
histone family protein DNA-binding protein
L1_008_000M1_scaffold_936_23
Clostridium sp. CAG:343, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(17078..18826)
DNA (1749bp) protein (583aa)
aspartyl-tRNA synthetase (EC:6.1.1.12)
Aspartate--tRNA ligase n=1 Tax=Clostridium sp. CAG:343 RepID=R6NDH6_9CLOT
Aspartate--tRNA ligase 2 {ECO:0000313|EMBL:CDC06379.1}; TaxID=1262796 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:343.;"
L1_008_000M1_scaffold_936_24
Clostridium sp. CAG:343, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19125..19496
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:343 RepID=R6N5P8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC06380.1}; TaxID=1262796 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:343.;"
L1_008_000M1_scaffold_936_25
Clostridium sp. CAG:343, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19551..20207
DNA (657bp) protein (219aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:343 RepID=R6NJG0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC06381.1}; TaxID=1262796 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:343.;"
L1_008_000M1_scaffold_936_26
Clostridium sp. CAG:343, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20396..20716
DNA (321bp) protein (107aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:343 RepID=R6P907_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC06382.1}; TaxID=1262796 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:343.;"
L1_008_000M1_scaffold_936_27
Clostridium sp. CAG:343, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20843..22630
DNA (1788bp) protein (596aa)
UvrABC system protein C n=1 Tax=Clostridium sp. CAG:343 RepID=R6N306_9CLOT
UvrABC system protein C {ECO:0000256|HAMAP-Rule:MF_00203, ECO:0000256|SAAS:SAAS00088139}; Short=Protein UvrC {ECO:0000256|HAMAP-Rule:MF_00203};; Excinuclease ABC subunit C {ECO:0000256|HAMAP-Rule:MF_00203}; TaxID=1262796 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:343.;"
excinuclease ABC subunit C
L1_008_000M1_scaffold_936_28
Clostridium sp. CAG:343, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22692..23213)
DNA (522bp) protein (174aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:343 RepID=R6NDI1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC06384.1}; TaxID=1262796 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:343.;"
L1_008_000M1_scaffold_936_29
Clostridium sp. CAG:343, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23398..23733)
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:343 RepID=R6N5Q4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC06385.1}; TaxID=1262796 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:343.;"
L1_008_000M1_scaffold_936_30
Clostridium sp. CAG:343, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23951..24160
DNA (210bp) protein (70aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:343 RepID=R6NJG5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC06386.1}; TaxID=1262796 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:343.;"
Displaying items 1-30 of 51 in total

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