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L1_008_000M1_scaffold_956

Search features with annotation key words

Displaying items 1-30 of 43 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_956_1
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3..713)
DNA (711bp) protein (237aa)
dTDP-glucose 4,6-dehydratase {ECO:0000256|RuleBase:RU004473}; EC=4.2.1.46 {ECO:0000256|RuleBase:RU004473};; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
dTDP-glucose 4,6-dehydratase (EC:4.2.1.46)
dTDP-glucose 4,6-dehydratase n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JGE4_9FIRM
L1_008_000M1_scaffold_956_2
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(890..1786)
DNA (897bp) protein (299aa)
Glucose-1-phosphate thymidylyltransferase {ECO:0000256|RuleBase:RU003706}; EC=2.7.7.24 {ECO:0000256|RuleBase:RU003706};; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Glucose-1-phosphate thymidylyltransferase (EC:2.7.7.24)
Glucose-1-phosphate thymidylyltransferase n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JGE3_9FIRM
L1_008_000M1_scaffold_956_3
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2019..3200)
DNA (1182bp) protein (394aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JGE2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES75822.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Methylase involved in ubiquinone/menaquinone biosynthesis
L1_008_000M1_scaffold_956_4
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3711..4466
DNA (756bp) protein (252aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JGE1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD76236.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L1_008_000M1_scaffold_956_5
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4616..5638
DNA (1023bp) protein (341aa)
Transmembrane protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CG29_9FIRM
Transmembrane protein {ECO:0000313|EMBL:CDD76238.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Predicted acyltransferases
L1_008_000M1_scaffold_956_6
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5870..6610
DNA (741bp) protein (247aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JGD8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES75818.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L1_008_000M1_scaffold_956_7
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6614..8098
DNA (1485bp) protein (495aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CEW6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD76242.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
putative efflux protein, MATE family
L1_008_000M1_scaffold_956_8
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8122..9822)
DNA (1701bp) protein (567aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JGD6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD76243.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L1_008_000M1_scaffold_956_9
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10276..11517
DNA (1242bp) protein (414aa)
O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase (EC:2.5.1.49)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JGD5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES75815.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L1_008_000M1_scaffold_956_10
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11763..12557)
DNA (795bp) protein (265aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=R7CEB2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD76250.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component
L1_008_000M1_scaffold_956_11
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12547..13314)
DNA (768bp) protein (256aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JGD3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD76252.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component
L1_008_000M1_scaffold_956_12
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13771..14802
DNA (1032bp) protein (344aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JGD2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD76254.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L1_008_000M1_scaffold_956_13
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14814..15434
DNA (621bp) protein (207aa)
Phosphatidylserine synthase (EC:2.7.8.8)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JGD1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD76256.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
L1_008_000M1_scaffold_956_14
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15518..16432
DNA (915bp) protein (305aa)
Phosphatidylserine decarboxylase proenzyme {ECO:0000256|SAAS:SAAS00154492}; EC=4.1.1.65 {ECO:0000256|SAAS:SAAS00093350};; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Phosphatidylserine decarboxylase (EC:4.1.1.65)
Phosphatidylserine decarboxylase n=2 Tax=Ruminococcus RepID=C6JGD0_9FIRM
L1_008_000M1_scaffold_956_15
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16505..17131
DNA (627bp) protein (209aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JGC9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD76260.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L1_008_000M1_scaffold_956_16
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17497..18876
DNA (1380bp) protein (460aa)
Argininosuccinate lyase {ECO:0000256|HAMAP-Rule:MF_00006, ECO:0000256|SAAS:SAAS00211019}; Short=ASAL {ECO:0000256|HAMAP-Rule:MF_00006};; EC=4.3.2.1 {ECO:0000256|HAMAP-Rule:MF_00006, ECO:0000256|SAAS:SAAS00211017};; Arginosuccinase {ECO:0000256|HAMAP-Rule:MF_00006}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
argininosuccinate lyase (EC:4.3.2.1)
Argininosuccinate lyase n=2 Tax=Ruminococcus RepID=C6JGC8_9FIRM
L1_008_000M1_scaffold_956_17
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19013..20098
DNA (1086bp) protein (362aa)
aspartate-semialdehyde dehydrogenase (non-peptidoglycan organisms) (EC:1.2.1.11)
Aspartate-semialdehyde dehydrogenase n=2 Tax=Ruminococcus RepID=C6JGC7_9FIRM
Aspartate-semialdehyde dehydrogenase {ECO:0000313|EMBL:EES75807.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L1_008_000M1_scaffold_956_18
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20133..20399
DNA (267bp) protein (89aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JGC6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD76264.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Protein of unknown function (DUF3343).
L1_008_000M1_scaffold_956_19
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20646..21683
DNA (1038bp) protein (346aa)
Selenide, water dikinase {ECO:0000256|HAMAP-Rule:MF_00625, ECO:0000256|SAAS:SAAS00014883}; EC=2.7.9.3 {ECO:0000256|HAMAP-Rule:MF_00625, ECO:0000256|SAAS:SAAS00014883};; Selenium donor protein {ECO:0000256|HAMAP-Rule:MF_00625}; Selenophosphate synthase {ECO:0000256|HAMAP-Rule:MF_00625}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
selenophosphate synthase (EC:2.7.9.3)
Selenide, water dikinase n=2 Tax=Ruminococcus RepID=C6JGC5_9FIRM
L1_008_000M1_scaffold_956_20
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21924..22679
DNA (756bp) protein (252aa)
Formate/nitrite transporter n=2 Tax=Ruminococcus RepID=C6JGC4_9FIRM
Formate/nitrite transporter {ECO:0000313|EMBL:CDD76268.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Formate/nitrite family of transporters
L1_008_000M1_scaffold_956_21
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22681..24861
DNA (2181bp) protein (727aa)
DNA topoisomerase {ECO:0000256|RuleBase:RU000518, ECO:0000256|SAAS:SAAS00046608}; EC=5.99.1.2 {ECO:0000256|RuleBase:RU000518, ECO:0000256|SAAS:SAAS00046608};; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Topoisomerase IA (EC:5.99.1.2)
DNA topoisomerase n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CEC8_9FIRM
L1_008_000M1_scaffold_956_22
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24924..25592
DNA (669bp) protein (223aa)
UDP-N-acetylglucosamine pyrophosphorylase n=1 Tax=Ruminococcus sp. JC304 RepID=UPI000316B3BC
Uncharacterized protein {ECO:0000313|EMBL:CDD76272.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L1_008_000M1_scaffold_956_23
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25595..26416
DNA (822bp) protein (274aa)
Transglutaminase-like superfamily n=1 Tax=Eubacterium sp. CAG:146 RepID=R5GPA7_9FIRM
Transglutaminase-like superfamily {ECO:0000313|EMBL:CCY14572.1}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
Transglutaminase-like superfamily.
L1_008_000M1_scaffold_956_24
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26357..27211)
DNA (855bp) protein (285aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JGC1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD76274.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
TraX protein.
L1_008_000M1_scaffold_956_25
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27464..28156
DNA (693bp) protein (231aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JGC0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES75800.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L1_008_000M1_scaffold_956_26
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28175..29185
DNA (1011bp) protein (337aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JGB9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES75799.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L1_008_000M1_scaffold_956_27
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29430..31865)
DNA (2436bp) protein (812aa)
cellobiose phosphorylase (EC:2.4.1.20)
glycosyl transferase n=1 Tax=Ruminococcus sp. JC304 RepID=UPI0003144856
Glycosyltransferase family 36 {ECO:0000313|EMBL:EDM85891.1}; TaxID=411459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum ATCC 29174.;"
L1_008_000M1_scaffold_956_28
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32251..33264
DNA (1014bp) protein (338aa)
LacI family transcriptional regulator n=1 Tax=Ruminococcus sp. JC304 RepID=UPI0002DD9429
Sugar-binding domain protein {ECO:0000313|EMBL:CCY33359.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
transcriptional regulator, LacI family
L1_008_000M1_scaffold_956_29
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33327..34004
DNA (678bp) protein (226aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JBQ4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES78041.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Predicted membrane protein
L1_008_000M1_scaffold_956_30
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34073..35785)
DNA (1713bp) protein (571aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CM61_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD78463.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
ammonium transporter
Displaying items 1-30 of 43 in total

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