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L1_008_000M1_scaffold_53_19

Organism: L1_008_000M1_public_UNK

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 20 / 38 MC: 16
Location: 19908..20684

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5ETK7_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 74.4
  • Coverage: 258.0
  • Bit_score: 384
  • Evalue 8.10e-104
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.0
  • Coverage: 258.0
  • Bit_score: 384
  • Evalue 1.10e-103
FliA/WhiG subfamily RNA polymerase sigma-28 subunit similarity KEGG
DB: KEGG
  • Identity: 73.3
  • Coverage: 258.0
  • Bit_score: 380
  • Evalue 3.30e-103

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Taxonomy

[Clostridium] bolteae → Lachnoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 777
ATGGCAGGCTACAAAGTGGAAATCTGCGGAGTCAACACGGCAACGTTGCCTCTGCTTGACAGCAGTGAGAAGGAAACTTTGTTCCACCGAATCAAAAATGGAGATCAACAGGCGCGTGAGCTTTACATTACTGGAAATTTACGTCTCGTTTTAAGTGTGATTGGCCGCTTTTCTTCAAGCGGTGAAAATATTGATGATTTGTTTCAGATCGGCTGCATTGGCTTAATGAAGGCAATTGACAATTTTGATCTTAGTCATCAGGTTAAATTTTCAACCTACGCAGTTCCGATGATCATCGGTGAGGTAAGACGCTTTTTGCGGGACAACAACAGTATACGTGTCTCTCGTTCCCTTCGCGATATCGCTTATAAAACTGTTTCCGCAAGGGAAGCACTGACAAGGGAGCTTGACCGTGAGCCAACTCTTGACGAGATTGCTGAGCGCACTAGCATTAGCCGTGAGGAAATTATTCAGTCGCTTGATGCGATTCAAAGTCCGCTCAGTCTTTATGAGCCCGTTTACAGTGACGGCGGTGACACGCTCTACGTCATGGATCAAATCAGTGATAAGAAAAATAAAGAGGATAACTGGGTTCAGGAGATTGCACTTTGTGAGGCATTAAAAAAGCTCCCTAAGCGGGAGCAGCGCATCATCAAAATGCGTTTTTATGAGGGAAAGACTCAGATGGAGATTGCACAGGAAATACACATTTCTCAGGCGCAGGTCTCTCGTCTTGAAAAAAGTGCTTTAAAAACAATGAAGGGATATCTCAGCTGA
PROTEIN sequence
Length: 259
MAGYKVEICGVNTATLPLLDSSEKETLFHRIKNGDQQARELYITGNLRLVLSVIGRFSSSGENIDDLFQIGCIGLMKAIDNFDLSHQVKFSTYAVPMIIGEVRRFLRDNNSIRVSRSLRDIAYKTVSAREALTRELDREPTLDEIAERTSISREEIIQSLDAIQSPLSLYEPVYSDGGDTLYVMDQISDKKNKEDNWVQEIALCEALKKLPKREQRIIKMRFYEGKTQMEIAQEIHISQAQVSRLEKSALKTMKGYLS*