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L1_008_000M1_scaffold_53_26

Organism: L1_008_000M1_public_UNK

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 20 / 38 MC: 16
Location: comp(26787..27527)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Ruminococcus lactaris ATCC 29176 RepID=B5CPC6_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 74.8
  • Coverage: 222.0
  • Bit_score: 332
  • Evalue 2.70e-88
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=471875 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris ATCC 29176.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.8
  • Coverage: 222.0
  • Bit_score: 332
  • Evalue 3.70e-88
RNA polymerase, sigma 29 subunit, SigE similarity KEGG
DB: KEGG
  • Identity: 73.9
  • Coverage: 222.0
  • Bit_score: 331
  • Evalue 1.70e-88

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Taxonomy

Ruminococcus lactaris → Ruminococcus → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 741
ATGACAAAGTGGCAGACAAAAGAACAGACAAAGGCATGGCGTACCTTTTTACAGCATTTTTCAGCAGGCATGGGAGGAAAAGGCAGAATTTATTACATAGGCGGAACGGATGTGCTCCCACAGCCATTAACACCAAAAGAAGAGGAGCATCTAATTTCGTGTATGGGAACAGTCGGGGAAAAAGAAGCAAAAAGCAGACTGATCGAACATAATTTGCGTCTTGTCGTTTACATCGCAAAGAAATTTGAAAACACAGGAGTAGGTGTAGAGGATTTGATTTCAATCGGCACGATTGGTCTGATCAAAGGTATCAATACATTCAACAAGACAAAAAAGATCAAGCTGGCAACATATGCGTCACGCTGTATCGAAAACGAAATATTAATGTATCTCAGACGAAACAGCAAGCGAAAAACAGAAGTCTCAATAGACGAGCCATTAAACGTTGACTGGGACGGCAACGAGCTTCTATTATCAGATATTTTAGGAACAGACGAAGATATGGTATACCGCGACATGGAAGAAGAAGCAGAGCGCAGACAGCTCTCAAACGCATTGTCAAAGCTTCCATCACGCGAACGCCGTATAGTAGAGCTTCGCTATGGAATAAACACAGACGATGACCGCGAAATGACACAAAAAGAAGTAGCCGACTTAATGGGCATATCCCAATCCTACATCTCCCGCCTAGAAAAAAAGATCATGAACCGCCTCAGAAAAGATCTGGTACGCTACGGGTAA
PROTEIN sequence
Length: 247
MTKWQTKEQTKAWRTFLQHFSAGMGGKGRIYYIGGTDVLPQPLTPKEEEHLISCMGTVGEKEAKSRLIEHNLRLVVYIAKKFENTGVGVEDLISIGTIGLIKGINTFNKTKKIKLATYASRCIENEILMYLRRNSKRKTEVSIDEPLNVDWDGNELLLSDILGTDEDMVYRDMEEEAERRQLSNALSKLPSRERRIVELRYGINTDDDREMTQKEVADLMGISQSYISRLEKKIMNRLRKDLVRYG*