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L1_008_000M1_scaffold_40_35

Organism: L1_008_000M1_public_UNK

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 20 / 38 MC: 16
Location: 32871..33587

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Clostridium sp. CAG:1013 RepID=R5AFW4_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 78.8
  • Coverage: 222.0
  • Bit_score: 351
  • Evalue 4.10e-94
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=1262769 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1013.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.8
  • Coverage: 222.0
  • Bit_score: 351
  • Evalue 5.70e-94
RNA polymerase, sigma 29 subunit, SigE similarity KEGG
DB: KEGG
  • Identity: 74.1
  • Coverage: 216.0
  • Bit_score: 315
  • Evalue 9.20e-84

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Taxonomy

Clostridium sp. CAG:1013 → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 717
ATGAAACACGATTTTCTCACCCGCATGCGCGAAATTTTTGCTCACTTTTTATCAAAGCTGAACGAAGACACCTGCCACTACATAAACGGCCCGGAAACGCTTCCGCCACCGCTGACGAAAGCGGAAGAACAGGTGATTTTTCAGAACATCCGTGACGGAAAACCGAACGCACGCGACCCTCTTATTACGCATAACCTGCGGCTTGTCGTGTACATTGCGAAAAAATTTGAATCGCCTGCCGTGAACGTGGAAGACCTCATTTCCATCGGCACCATCGGGCTCATCAAAGCGGTAAATACGTTCAGCGTGGAGCGCAATATCAAGCTTGCGACGTATGCTTCTCGGTGCATTGAAAACGAGATTCTGATGTACCTGCGCAAAACGGCGCAGCTGAAAAACGAGATCTCGCTCGACGACCCGCTGAATGTGGATTGGGACGGCAACGAGCTCCTGCTCTCCGATCTACTCGGCAGCGACCCCGACATTGTGAATCGCGGCATCGAGCAGGAATCGGAAAAGCAAACGCTGCTCCGTGCCGTTGAAAAGCTTGACCCGCGCGAAAAGCAGATCATGGAGCTGCGGTTTGGGCTGAACCGGCAAAAGGAGCACACGCAAAAGGAAGTTGCCGATGCACTCGGCATTTCGCAGTCGTACATCTCAAGGCTTGAAAAGCGCATTTTGCACCGATTGAAAACAGAAATGGAGAAGGCGGGATAA
PROTEIN sequence
Length: 239
MKHDFLTRMREIFAHFLSKLNEDTCHYINGPETLPPPLTKAEEQVIFQNIRDGKPNARDPLITHNLRLVVYIAKKFESPAVNVEDLISIGTIGLIKAVNTFSVERNIKLATYASRCIENEILMYLRKTAQLKNEISLDDPLNVDWDGNELLLSDLLGSDPDIVNRGIEQESEKQTLLRAVEKLDPREKQIMELRFGLNRQKEHTQKEVADALGISQSYISRLEKRILHRLKTEMEKAG*