ggKbase home page
Advanced Search
Search Help

L1_008_000M1_scaffold_239_9

Organism: L1_008_000M1_public_UNK

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 20 / 38 MC: 16
Location: 10964..14941

Top 3 Functional Annotations

View all annotations
Value Algorithm Source
RND transporter HAE1/HME family permease protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6YT29_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 96.6
  • Coverage: 1320.0
  • Bit_score: 2417
  • Evalue 0.0
RND transporter HAE1/HME family permease protein {ECO:0000313|EMBL:CDD34559.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.6
  • Coverage: 1320.0
  • Bit_score: 2417
  • Evalue 0.0
Cation/multidrug efflux pump similarity KEGG
DB: KEGG
  • Identity: 44.7
  • Coverage: 1316.0
  • Bit_score: 1099
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Roseburia sp. CAG:309 → Roseburia → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 3978
ATGTTATCAAAATTTAGTGTACGAAAACCTTATACGGTTCTCGTGGCAGTGGTGTTAGTAATTGTGCTTGGCATCCTGTCATTCAGCAACATGAGTACGGATCTTATGCCGGACATGGAATTTCCCTATGCCATCGTTATGACGACATATCCGGGAGCAAGCCCGGAAGAAATTGAGACGGCAGTGACAAAGCCGGTGGAACAGGCTATGGCAAGTATTACCAATATGAAACAGGTATCTTCTGTTTCGAATAGTAATATGTCGGTTGTTATCCTGGAATTTAATGAAAATACAGATATGAATTCCGCGACGATCGATATGCGTGAGAGCCTGGATACCGTTTCCGCACAGTGGGATGACAGCATCGGAAATCCGACGATCATGAAGATCAATCCGGACATGATGCCAATTATGGTGGCAGCACTTGACTACGATAATATGGATAGTGTCGGTGTTACGGAAAAGGCTGAAAATGATATTATACCGGAACTGGAAAGGGTAGAAGGTGTGGCATCTGTCAATGCTTCCGGTGAAGTAGACAAAAAGATCGAAGTGATCGTTCAGGAAGACAAGATCAAAGAAATGAATCAGAAGGTTCAGGATGCGATCGATGGAAAACTGCAGGATGCTTCGGATAAGATAGAGAAAAATAAAAATAAGATCCGGGATGGAAAAGATACATTATCTGACAAACAGGATCAGGCAGCAGATAAGCTGGCAAAAGGAGAGGCAAAATTAAATCAGTCCTCAGAAAAGATGAAAAAGACGTTAGAGACGATCAATACCAATCTGAAGACCATCGAATCCAAAGAAAAAGAACTGAAAACAGCAGAAAAGCAGGTAAAGACCGGTCAGGCTCAGATCAGTACGCAGAAAACAAGCCTTCAGGCGACGATCAAGATGCTGACTGCGACAAAAACTTCTCTTACCCAGCTGCAGGCAAGTCTTTCCGCTTTGACAGAGCAGAAACAGGCTTTGGAAACCCAGATTGCAGCAGTAGGGGAAACAGCGGAATTGAAGAGCCAGCTGGAGGCAGTCAATACGCAGCTTACCGTAATACAGCAGAAACTGACAGAGCAGGGAATGACGCAGGAGGATCTCCCGGGTAAGATCACAGAAGTGGAAAGCGGACTTTCGAAAGCCCAGGAAGGAATGCAGACGATCACAGCGCAGGAAAAGAAACTGGCTGCCAGCAAAAAGCAGTTAAAGAGCGGAAAGAAAAAGATTGCTGCCGGAAAAGCAAAACTTCTTGATGCGAAAGATAAACTGGAAAAAGGACAGATTTCTGTCGAGGAAGCAAAAAATGAGATCAGCAAACAGAAAGTGCTGGTTGCCATTAAACTGAGTGTAGCAGAAGTTCAGGTAAATACCGGAGAAAGCAAACTTGACGAAGCCGAAAAGCAGTTAAAAGACAGTAAAAAGACGACCAAAGAAGGGGCAGATCTCAAAAAGATCATTACCAAATCGATGGTTGAGAATATATTAAAAGCAGAAAACTTTGATATGCCGGCTGGTTATATTACAGACAATGAAGCTTCTTATCTTGTCAAAGTCGGTGAAAAAGTAGAAGGCCAAAAGGATATCGAAAATCTGGTGATCTGCGATATGGGATTTGATGATCTCGATCCAATCCGGCTTTCGGATGTGGCAGATATTGCAATAACGGATAATTCCAAAGATGTGTACACGATGGTAAATGGAAATCCGGCGGTAGCACTTACGATGGAAAAGGCGACCGGATATTCTACCGGAGATGTTACCAAACGTCTGGAAAGCCGTTTAGACCAGCTTGAAAAAGACAATGAGGGACTACATACTACGGTTCTTATGAACCAGGGATTGTACATCGATCTTGTTGTTGATTCCGTAGTGGATAACCTGTTATATGGAGCATTGTTCTCCATCATCATCTTACTGCTGTTCTTAAAGGATCTGCGGCCGACATTTATCGTCGCCTGCTCAATCCCACTCAGTGTTGTGGCAGCAGTGGTATTGATGTATTTCAGTGGTGTGACCTTGAATGTAATTTCTTTGTCGGGACTTGCGCTCGGCGTCGGAATGTTAGTGGATAACTCCGTCGTGGTTATTGAAAATATATTCCGACTGCGAAATGAAGAAGGTTACAGCATTAAAGAAGCATCGATCGAAGGCGCAAAGCAGGTCGGTGGAGCAATTCTTGCCTCTACCCTTACGACCATTTGTGTGTTTGCACCGATCGTATTTACCGAGGGAATTACGAGACAGTTATTTACAGATCTTGCCCTGACACTTGCGTACTCGCTGCTTGCCAGCCTTGTCGTTGCGCTGACACTGGTACCGGCGATGTCTCAGGGAATGCTTCGTAAGGTAAAAGATAATCCGAATAAATTGATCGTAAAGATTCAGAATGTGTATGGAAAAGTGCTTTCTGTGCTTCTTCATAAAAAGATATTTGTTTTGCTTGGTGCCCTTGTACTGCTTGTGGTATTTGCCCTTTTGTCGGTATCAAGAGGAACAGCGTTTATGCCGGAGATGCGCAGTACGCAGATGACGGCGGCCATTTCCATTCCAAAAGACGACGATACGATGAGCAAGCAGGATCTTTATGAAAAATCAAATGAGGTCATGGAACAATTTTTGAAAGTAGATGGCGTTGAGACTGTCGGTGCGATGTCCGGCGGTGGCGGTATGATGTCGATGATGTCCGGTGGTTCCGATTCGATCTCCGTGTATGTGCTTTTGAATGAAGACAATAAACGCTCCAATCAGGATATCAAAAAAGAAATGGAAGAAAAAGTAAAAAATATTCCATGTGATGTGTCGATCGAGGCGTCAGCGATGGATATGAGTTCCATGTTTGGTTCGGGTATCACGATGCGGATCAAAGGAAAAGATCTGGATAAAATCCAGAAGATTTCCGAAGATATTATGAAACAGTTAGAGGGTGTCGACGGAATTACAGAAATTACCAATGGTATGGAAGATGCAAGTCAGGAATTCCGTATCACTGTGAAAAAAGATAAAGCGATGGAATATTCGCTGACGGTAGCCCAGGTGTTCCAGCAGATCAACGCACGTGTAAAAGAGGCATCTTCTGCGACAACATTGTCTACGGATACCGAAGACCTTGATGTGTATGTAAGTGATGAAAAAGATGAAAAACTCAAACGAAGTGACATTGAGAAGATGAAAATCGAGTATACCGATTCACAGACGCAGAAGACAAAGAAAGTAAAATTGTCAAAGATCGCGGACTTTAGTATGGCAGATACGCCATCTTCCATTAACCGAATTAACCAGACAAGATATATGACAGTATCTCTTACCCTGGGAGACGATTACAATGTCGGACTGGTAAGTAACGATGTGCATGCGGTGCTTGATAAATATGAGATGCCATCCGGATATGAACTGGAATTTACCGGAGAAGACGAAAACATCAATGAGTCCATTAAACAGGTGGCTTTGATGTTTATCGTCGGTGTCATTTTCATGTATTTGATCATGGTAGCCCAGTTCCAGTCCCTGCTGTCACCATTTATTATCCTGTTTACCATTCCACTTGCTTTCACCGGCGGATTTATGGGGCTCTGGATATCCGGAAGCGAAGTCAGTGTCATTGCCTTGATCGGATTTGTCATGCTTTCCGGTATCATCGTAAACAACGGTATCGTGCTGGTAGACTATATCAACCAGCTGCGTGAACAGGGTATGACCAAATACGAGGCAATCGTTGAAGCCGGAAAAACCAGACTTCGTCCAATCCTCATGACGGCATTGACGACGATCCTCGGTCTGCTTCCAATGATCATAAGCAGCGACAGTGGTTCGGATATGATTCGTCCAATGTCCATCGTAACGATCGGCGGATTGATCTATGGTACGCTTCTGACACTCTTTGTGGTGCCATGTATCTATGCAATCCTGAATCGTAAAAAAGACCGTGCCGTGCAGAGGAAATCGAAAAGAAATCCGAAAAATAGGTTGCAACAAAAATAG
PROTEIN sequence
Length: 1326
MLSKFSVRKPYTVLVAVVLVIVLGILSFSNMSTDLMPDMEFPYAIVMTTYPGASPEEIETAVTKPVEQAMASITNMKQVSSVSNSNMSVVILEFNENTDMNSATIDMRESLDTVSAQWDDSIGNPTIMKINPDMMPIMVAALDYDNMDSVGVTEKAENDIIPELERVEGVASVNASGEVDKKIEVIVQEDKIKEMNQKVQDAIDGKLQDASDKIEKNKNKIRDGKDTLSDKQDQAADKLAKGEAKLNQSSEKMKKTLETINTNLKTIESKEKELKTAEKQVKTGQAQISTQKTSLQATIKMLTATKTSLTQLQASLSALTEQKQALETQIAAVGETAELKSQLEAVNTQLTVIQQKLTEQGMTQEDLPGKITEVESGLSKAQEGMQTITAQEKKLAASKKQLKSGKKKIAAGKAKLLDAKDKLEKGQISVEEAKNEISKQKVLVAIKLSVAEVQVNTGESKLDEAEKQLKDSKKTTKEGADLKKIITKSMVENILKAENFDMPAGYITDNEASYLVKVGEKVEGQKDIENLVICDMGFDDLDPIRLSDVADIAITDNSKDVYTMVNGNPAVALTMEKATGYSTGDVTKRLESRLDQLEKDNEGLHTTVLMNQGLYIDLVVDSVVDNLLYGALFSIIILLLFLKDLRPTFIVACSIPLSVVAAVVLMYFSGVTLNVISLSGLALGVGMLVDNSVVVIENIFRLRNEEGYSIKEASIEGAKQVGGAILASTLTTICVFAPIVFTEGITRQLFTDLALTLAYSLLASLVVALTLVPAMSQGMLRKVKDNPNKLIVKIQNVYGKVLSVLLHKKIFVLLGALVLLVVFALLSVSRGTAFMPEMRSTQMTAAISIPKDDDTMSKQDLYEKSNEVMEQFLKVDGVETVGAMSGGGGMMSMMSGGSDSISVYVLLNEDNKRSNQDIKKEMEEKVKNIPCDVSIEASAMDMSSMFGSGITMRIKGKDLDKIQKISEDIMKQLEGVDGITEITNGMEDASQEFRITVKKDKAMEYSLTVAQVFQQINARVKEASSATTLSTDTEDLDVYVSDEKDEKLKRSDIEKMKIEYTDSQTQKTKKVKLSKIADFSMADTPSSINRINQTRYMTVSLTLGDDYNVGLVSNDVHAVLDKYEMPSGYELEFTGEDENINESIKQVALMFIVGVIFMYLIMVAQFQSLLSPFIILFTIPLAFTGGFMGLWISGSEVSVIALIGFVMLSGIIVNNGIVLVDYINQLREQGMTKYEAIVEAGKTRLRPILMTALTTILGLLPMIISSDSGSDMIRPMSIVTIGGLIYGTLLTLFVVPCIYAILNRKKDRAVQRKSKRNPKNRLQQK*