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L1_008_000M1_scaffold_239

Search features with annotation key words

Displaying items 1-30 of 81 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_239_1
Clostridium sp. CAG:167, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(101..1213)
DNA (1113bp) protein (371aa)
glycosyltransferase (EC:2.4.1.-)
Glycosyltransferase group 2 family protein n=1 Tax=Clostridium sp. CAG:167 RepID=R5VSG7_9CLOT
Glycosyltransferase group 2 family protein {ECO:0000313|EMBL:CCZ90754.1}; TaxID=1262777 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:167.;"
L1_008_000M1_scaffold_239_2
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1384..2391
DNA (1008bp) protein (336aa)
Glycosyltransferase group 2 family protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6Z0L6_9FIRM
Glycosyltransferase group 2 family protein {ECO:0000313|EMBL:CDD34436.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
Glycosyltransferases, probably involved in cell wall biogenesis
L1_008_000M1_scaffold_239_3
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2388..4118
DNA (1731bp) protein (577aa)
LicD3 protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6YKM1_9FIRM
LicD3 protein {ECO:0000313|EMBL:CDD34435.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
L1_008_000M1_scaffold_239_4
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4120..5088
DNA (969bp) protein (323aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6YSM6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD34434.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
glycosyl transferase 2 family protein
L1_008_000M1_scaffold_239_5
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5104..6204
DNA (1101bp) protein (367aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6YEL0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD34433.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
hypothetical protein
L1_008_000M1_scaffold_239_6
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6149..7522)
DNA (1374bp) protein (458aa)
O-antigen polymerase n=1 Tax=Roseburia sp. CAG:309 RepID=R6ZVA9_9FIRM
O-antigen polymerase {ECO:0000313|EMBL:CDD34432.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
O-antigen polymerase
L1_008_000M1_scaffold_239_7
Clostridium sp. CAG:167, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7722..9713
DNA (1992bp) protein (664aa)
Capsular polysaccharide biosynthesis protein Cap5D n=1 Tax=Clostridium sp. CAG:167 RepID=R5VJ85_9CLOT
Capsular polysaccharide biosynthesis protein Cap5D {ECO:0000313|EMBL:CCZ90768.1}; TaxID=1262777 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:167.;"
polysaccharide biosynthesis protein CapD
L1_008_000M1_scaffold_239_8
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9664..10857
DNA (1194bp) protein (398aa)
Putative glycerol phosphotransferase n=1 Tax=Roseburia sp. CAG:309 RepID=R6YL43_9FIRM
Putative glycerol phosphotransferase {ECO:0000313|EMBL:CDD34560.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
putative glycerol phosphotransferase
L1_008_000M1_scaffold_239_9
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10964..14941
DNA (3978bp) protein (1326aa)
RND transporter HAE1/HME family permease protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6YT29_9FIRM
RND transporter HAE1/HME family permease protein {ECO:0000313|EMBL:CDD34559.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
Cation/multidrug efflux pump
L1_008_000M1_scaffold_239_10
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15016..15828
DNA (813bp) protein (271aa)
Glutamate racemase {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00031911}; EC=5.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00041166};; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
glutamate racemase (EC:5.1.1.3)
Glutamate racemase n=1 Tax=Roseburia sp. CAG:309 RepID=R6YF02_9FIRM
L1_008_000M1_scaffold_239_11
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15815..16612
DNA (798bp) protein (266aa)
Membrane proteins related to metalloendopeptidases n=1 Tax=Roseburia sp. CAG:309 RepID=R6ZVR5_9FIRM
Membrane proteins related to metalloendopeptidases {ECO:0000313|EMBL:CDD34557.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
Membrane proteins related to metalloendopeptidases
L1_008_000M1_scaffold_239_12
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16635..17213
DNA (579bp) protein (193aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6Z104_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD34556.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
hypothetical protein
L1_008_000M1_scaffold_239_13
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17188..18183
DNA (996bp) protein (332aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
pseudouridine synthase, RluA family (EC:5.4.99.12)
Pseudouridine synthase n=1 Tax=Roseburia sp. CAG:309 RepID=R6YL40_9FIRM
L1_008_000M1_scaffold_239_14
Eubacterium sp. 14-2, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18203..18766
DNA (564bp) protein (188aa)
DJ-1 family protein n=1 Tax=Eubacterium sp. 14-2 RepID=S0JIL2_9FIRM
DJ-1 family protein {ECO:0000313|EMBL:EOT26806.1}; TaxID=1235790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium sp. 14-2.;"
ThiJ family intracellular protease
L1_008_000M1_scaffold_239_15
Clostridium sp. L2-50, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18880..21270
DNA (2391bp) protein (797aa)
Bacterial group 2 Ig-like protein n=1 Tax=Clostridium sp. L2-50 RepID=A7VCZ4_9CLOT
Bacterial group 2 Ig-like protein {ECO:0000313|EMBL:EDO58741.1}; TaxID=411489 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. L2-50.;"
Bacterial surface proteins containing Ig-like domains
L1_008_000M1_scaffold_239_16
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21467..21997
DNA (531bp) protein (177aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6Z100_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD34551.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
conserved hypothetical protein
L1_008_000M1_scaffold_239_17
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22017..23504
DNA (1488bp) protein (496aa)
Putative lipoprotein n=1 Tax=Roseburia sp. CAG:309 RepID=R6YL35_9FIRM
Putative lipoprotein {ECO:0000313|EMBL:CDD34550.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
hypothetical protein
L1_008_000M1_scaffold_239_18
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23505..24068
DNA (564bp) protein (188aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6YT19_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD34549.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
phosphoesterase PA-phosphatase-like protein
L1_008_000M1_scaffold_239_19
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24074..24754
DNA (681bp) protein (227aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6YEZ4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD34548.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
L1_008_000M1_scaffold_239_20
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25010..25825
DNA (816bp) protein (272aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6ZVQ6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD34547.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
hypothetical protein
L1_008_000M1_scaffold_239_21
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25845..26198
DNA (354bp) protein (118aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6Z0Z8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD34546.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
L1_008_000M1_scaffold_239_22
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26195..27496)
DNA (1302bp) protein (434aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6YL30_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD34545.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
hypothetical protein
L1_008_000M1_scaffold_239_23
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27575..29185)
DNA (1611bp) protein (537aa)
ABC transporter related n=1 Tax=Roseburia sp. CAG:309 RepID=R6YT16_9FIRM
ABC transporter related {ECO:0000313|EMBL:CDD34544.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
ABC transporter
L1_008_000M1_scaffold_239_24
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29521..31368
DNA (1848bp) protein (616aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6YEZ2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD34543.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
alpha amylase
L1_008_000M1_scaffold_239_25
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31365..31556)
DNA (192bp) protein (64aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6ZVQ2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD34542.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
L1_008_000M1_scaffold_239_26
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31645..32094
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6Z0Z5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD34541.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
hypothetical protein
L1_008_000M1_scaffold_239_27
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32205..34241
DNA (2037bp) protein (679aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6YL26_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD34540.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
Molecular chaperone, HSP90 family
L1_008_000M1_scaffold_239_28
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34882..35259
DNA (378bp) protein (126aa)
Predicted transcriptional regulator n=1 Tax=Roseburia sp. CAG:197 RepID=R5YVV4_9FIRM
Predicted transcriptional regulator {ECO:0000313|EMBL:CDA25591.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
transcriptional regulator, GntR family
L1_008_000M1_scaffold_239_29
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35276..35833
DNA (558bp) protein (186aa)
ABC-type multidrug transport system ATPase component n=1 Tax=Roseburia sp. CAG:309 RepID=R6YEY7_9FIRM
ABC-type multidrug transport system ATPase component {ECO:0000313|EMBL:CDD34538.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
ABC-type multidrug transport system, ATPase component
L1_008_000M1_scaffold_239_30
unknown

Not on your lists

36265..36447
DNA (183bp) protein (61aa)

This feature has no annotations

Displaying items 1-30 of 81 in total

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