ggKbase home page

L1_008_000M1_scaffold_397_29

Organism: L1_008_000M1_public_UNK

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 20 / 38 MC: 16
Location: 30880..32154

Top 3 Functional Annotations

Value Algorithm Source
Bacterial type II secretion system domain protein F n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5GZ23_9BIFI similarity UNIREF
DB: UNIREF100
  • Identity: 97.7
  • Coverage: 426.0
  • Bit_score: 799
  • Evalue 1.30e-228
Type IV pilus biogenesis protein PilC {ECO:0000313|EMBL:KFI97603.1}; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 424.0
  • Bit_score: 817
  • Evalue 6.60e-234
Type IV fimbrial assembly protein PilC similarity KEGG
DB: KEGG
  • Identity: 97.4
  • Coverage: 426.0
  • Bit_score: 798
  • Evalue 8.30e-229

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Bifidobacterium stercoris → Bifidobacterium → Bifidobacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1275
ATGGCCGGCAACGACGCGCAGGTTTCAATGGATAACGGCACCAGGCAGTGGCGTTATAAGGGCGTCTCATTCGACGGCCAGCGTAAAGAGAAGGGTGTGGTCGAAGCGCAGACGCGCGACCAAGCCATCGAACGCATTAAAAAACTCGGACTGTATCCGACCGATCTGACCGACACAGCTGCCGGCACCGGTCTCAATACTGAAATCAACATCAAGGCGTTCGAGAAATATCCAAGCAAAAAAGACTTCGCCGTAACGGCGCGGCAGCTCGCCACCATGGTGGCGGCTGGCGTCTCGCTGATCCGAGCCTTGAACATCGTCACCGAACAAATCGAGAACGTGAAGCTCCGCAAGGCAGTGCAGGCCTGCGTGACGCAAGTGGAAGGCGGCTCGTCCTTCTCCGAAGCCATGTCGGCGGATCCCGATTCCCTGTTCCCGCCAATCATGGTCAACATGGTTCGTGCCGGCGAGACCGGCGGCTTCCTAGACAAATCGCTGCTCACCGTGGCGGACAGCTTCGAAGCGGATGTGAGGCTCCAAGGGCAGATCAAAAGCGCCATGGCCTATCCGGTCGTGGTACTGGGCATCGCCCTGATCTTGGTGATGGTGATGCTGCTCACCATCGTGCCGATGTTCGCCAGCATGTACGATTCCATGAATGCCCAGTTGCCGTTCGTGACCCAGATCCTGGTGGACCTCGGCAAAGTGATGCCCTACGTGCTTCCGGTGCTGATTGTGGCCGTCGTGGCGCTGGCCATGTTCTGGAAGCGCAACCGTAACAAAGACATCATCCGCACCTGGTGGGATCCGTTCACACTCAAGGCACCGGTGTTCGGCAAGCTGGACACCAACGTGGCCCTGGCCCGCTTTTGCAATAATTTCTCTTCCATGCTCGCTTCCGGTGTGCCGATTCTCCAGGCACTTGATATCGTCGGATCGACTTCGGGCAACTATGTGATTGATTCGTCTTCGAAGCGTGTGGGCCGTTTGGTGGAACGTGGCTACCGTCTGGCCGACAGCATGAGCACCGAAAAGATCTTCCCGAACATGCTGGTGCAGATGGTGGCCATTGGCGAGGACTCCGGCGCCATCGACAAAATGCTGTCCAGTGCGGGCCGAGCGTATGACGAAGAGGCCCAATCCATGGCCAAACAGCTCACCTCGTTGCTGGAACCACTGATGATTCTGTTCCTCGGCGTGGTGGTCGGCTTCATGGTGGTGGCATTGTATATGCCGATGTTCTCCATGTTCGACGCCATCAATGGTCAGGCCTGA
PROTEIN sequence
Length: 425
MAGNDAQVSMDNGTRQWRYKGVSFDGQRKEKGVVEAQTRDQAIERIKKLGLYPTDLTDTAAGTGLNTEINIKAFEKYPSKKDFAVTARQLATMVAAGVSLIRALNIVTEQIENVKLRKAVQACVTQVEGGSSFSEAMSADPDSLFPPIMVNMVRAGETGGFLDKSLLTVADSFEADVRLQGQIKSAMAYPVVVLGIALILVMVMLLTIVPMFASMYDSMNAQLPFVTQILVDLGKVMPYVLPVLIVAVVALAMFWKRNRNKDIIRTWWDPFTLKAPVFGKLDTNVALARFCNNFSSMLASGVPILQALDIVGSTSGNYVIDSSSKRVGRLVERGYRLADSMSTEKIFPNMLVQMVAIGEDSGAIDKMLSSAGRAYDEEAQSMAKQLTSLLEPLMILFLGVVVGFMVVALYMPMFSMFDAINGQA*