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L1_008_000M1_scaffold_397

Search features with annotation key words

Displaying items 1-30 of 63 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_397_1
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1..330
DNA (330bp) protein (110aa)
Putative membrane protein n=1 Tax=Alistipes sp. CAG:53 RepID=R5W9B0_9BACT
Putative membrane protein {ECO:0000313|EMBL:CCZ96749.1}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
hypothetical protein
L1_008_000M1_scaffold_397_2
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

395..1594
DNA (1200bp) protein (400aa)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) {ECO:0000256|HAMAP-Rule:MF_00159, ECO:0000256|SAAS:SAAS00184189}; EC=1.17.7.3 {ECO:0000256|HAMAP-Rule:MF_00159, ECO:0000256|SAAS:SAAS00184173};; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00159}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase n=2 Tax=Bifidobacterium RepID=A7A8U9_BIFAD
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
L1_008_000M1_scaffold_397_3
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1785..3410
DNA (1626bp) protein (542aa)
Uncharacterized protein n=3 Tax=Bifidobacterium RepID=A1A2K4_BIFAA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAF39937.1}; TaxID=367928 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC; 11814 / E194a).;"
L1_008_000M1_scaffold_397_4
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3494..4234
DNA (741bp) protein (247aa)
DNA repair protein RecO n=1 Tax=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) RepID=RECO_BIFAA
DNA repair protein RecO {ECO:0000256|HAMAP-Rule:MF_00201, ECO:0000256|SAAS:SAAS00018750}; Recombination protein O {ECO:0000256|HAMAP-Rule:MF_00201}; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
DNA repair protein recO
L1_008_000M1_scaffold_397_5
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4240..5031
DNA (792bp) protein (264aa)
Isoprenyl transferase {ECO:0000256|HAMAP-Rule:MF_01139}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_01139};; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
Isoprenyl transferase n=2 Tax=Bifidobacterium adolescentis RepID=A1A2K2_BIFAA
undecaprenyl pyrophosphate synthase
L1_008_000M1_scaffold_397_6
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5140..6102
DNA (963bp) protein (321aa)
Uncharacterized protein n=1 Tax=Bifidobacterium dentium ATCC 27678 RepID=B1S6R3_9BIFI
CTP synthase {ECO:0000313|EMBL:KIM01028.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
CTP synthase (UTP-ammonia lyase)
L1_008_000M1_scaffold_397_7
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6155..7279)
DNA (1125bp) protein (375aa)
Possible inosine-uridine preferring nucleoside hydrolase n=1 Tax=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) RepID=A1A2K1_BIFAA
Nucleoside hydrolase {ECO:0000313|EMBL:KIM01071.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
inosine-uridine preferring nucleoside hydrolase
L1_008_000M1_scaffold_397_8
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7285..8352)
DNA (1068bp) protein (356aa)
NMT1/THI5-like protein n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A8U4_BIFAD
NMT1/THI5-like protein {ECO:0000313|EMBL:EDN82159.1}; TaxID=411481 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis L2-32.;"
ABC transporter substrate-binding protein
L1_008_000M1_scaffold_397_9
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8623..9390)
DNA (768bp) protein (256aa)
ABC transporter, permease protein n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A8U3_BIFAD
ABC transporter, permease protein {ECO:0000313|EMBL:EDN82158.1}; TaxID=411481 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis L2-32.;"
ABC transporter permease
L1_008_000M1_scaffold_397_10
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9753..11309)
DNA (1557bp) protein (519aa)
Sucrose-6-phosphate hydrolase n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A8U2_BIFAD
beta-fructofuranosidase (Sucrase/invertase); possible inulinase
Beta-fructofuranosidase (Sucrase/invertase) possible inulinase {ECO:0000313|EMBL:AJE06289.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L1_008_000M1_scaffold_397_11
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11512..12777)
DNA (1266bp) protein (422aa)
Sucrose transport protein n=1 Tax=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) RepID=A1A2J7_BIFAA
galactoside permease
Galactoside permease {ECO:0000313|EMBL:KFI97200.1}; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
L1_008_000M1_scaffold_397_12
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13190..14224)
DNA (1035bp) protein (345aa)
Sugar-binding domain protein n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A8T8_BIFAD
LacI-type transcriptional regulator
Sugar-binding domain protein {ECO:0000313|EMBL:EDN82153.1}; TaxID=411481 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis L2-32.;"
L1_008_000M1_scaffold_397_13
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14336..14701)
DNA (366bp) protein (122aa)
Uncharacterized protein n=3 Tax=Bifidobacterium RepID=A1A2J5_BIFAA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KIM01057.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L1_008_000M1_scaffold_397_14
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14799..15641)
DNA (843bp) protein (281aa)
Phosphomethylpyrimidine kinase {ECO:0000313|EMBL:EDN82151.1}; EC=2.7.4.7 {ECO:0000313|EMBL:EDN82151.1};; TaxID=411481 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis L2-32.;"
Phosphomethylpyrimidine kinase n=2 Tax=Bifidobacterium adolescentis RepID=A1A2J4_BIFAA
phosphomethylpyrimidine kinase
L1_008_000M1_scaffold_397_15
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15770..16525)
DNA (756bp) protein (252aa)
Thiamine-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00097}; Short=TP synthase {ECO:0000256|HAMAP-Rule:MF_00097};; Short=TPS {ECO:0000256|HAMAP-Rule:MF_00097};; EC=2.5.1.3 {ECO:0000256|HAMAP-Rule:MF_00097};; Thiamine-phosphate pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00097}; TaxID=367928 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC; 11814 / E194a).;"
Thiamine-phosphate synthase n=1 Tax=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) RepID=A1A2J3_BIFAA
thiamine biosynthesis protein ThiC
L1_008_000M1_scaffold_397_16
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16669..17553)
DNA (885bp) protein (295aa)
Hydroxyethylthiazole kinase {ECO:0000256|HAMAP-Rule:MF_00228, ECO:0000256|SAAS:SAAS00137030}; EC=2.7.1.50 {ECO:0000256|HAMAP-Rule:MF_00228, ECO:0000256|SAAS:SAAS00137030};; 4-methyl-5-beta-hydroxyethylthiazole kinase {ECO:0000256|HAMAP-Rule:MF_00228}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
Hydroxyethylthiazole kinase n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5GXT9_9BIFI
hydroxyethylthiazole kinase
L1_008_000M1_scaffold_397_17
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17771..18289)
DNA (519bp) protein (173aa)
Transcriptional regulator, MerR family n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A8T3_BIFAD
Transcriptional regulator, MerR family {ECO:0000313|EMBL:EDN82148.1}; TaxID=411481 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis L2-32.;"
transcriptional regulator
L1_008_000M1_scaffold_397_18
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18416..19318
DNA (903bp) protein (301aa)
Oxidoreductase, aldo/keto reductase family protein n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A8T2_BIFAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJE06281.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L1_008_000M1_scaffold_397_19
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19333..19587
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5GZ11_9BIFI
Flavodoxin
Flavodoxin/nitric oxide synthase {ECO:0000313|EMBL:KFI97192.1}; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
L1_008_000M1_scaffold_397_20
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20138..20617
DNA (480bp) protein (160aa)
Phosphate ABC transporter n=1 Tax=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) RepID=A1A2I9_BIFAA
phosphate ABC transporter
Phosphate ABC transporter {ECO:0000313|EMBL:AJE06279.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L1_008_000M1_scaffold_397_21
Bifidobacterium adolescentis CAG:119, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20604..21197
DNA (594bp) protein (198aa)
Uncharacterized protein n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5GQH8_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CCY17974.1}; TaxID=1263057 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium adolescentis CAG:119.;"
hypothetical protein
L1_008_000M1_scaffold_397_22
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21222..22373)
DNA (1152bp) protein (384aa)
Tat pathway signal sequence domain protein n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A8S8_BIFAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AII76622.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L1_008_000M1_scaffold_397_23
Bifidobacterium adolescentis CAG:119, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22417..24198)
DNA (1782bp) protein (594aa)
Tat pathway signal sequence domain protein n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5GZJ8_9BIFI
Tat pathway signal sequence domain protein {ECO:0000313|EMBL:CCY17976.1}; TaxID=1263057 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium adolescentis CAG:119.;"
hypothetical protein
L1_008_000M1_scaffold_397_24
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24359..26161)
DNA (1803bp) protein (601aa)
Twitching motility protein n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A8S6_BIFAD
Twitching motility protein PilT
Twitching motility protein {ECO:0000313|EMBL:EDN82141.1}; TaxID=411481 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis L2-32.;"
L1_008_000M1_scaffold_397_25
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26301..28076)
DNA (1776bp) protein (592aa)
Type II/IV secretion system protein n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A8S5_BIFAD
Type II/IV secretion system protein {ECO:0000313|EMBL:EDN82140.1}; TaxID=411481 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis L2-32.;"
Type IV fimbrial assembly2C ATPase PilB
L1_008_000M1_scaffold_397_26
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28371..29150
DNA (780bp) protein (260aa)
Prepilin-type cleavage/methylation N-terminal domain protein n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A8S4_BIFAD
Uncharacterized protein {ECO:0000313|EMBL:KIM01594.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
hypothetical protein
L1_008_000M1_scaffold_397_27
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29167..29838
DNA (672bp) protein (224aa)
Prepilin-type cleavage/methylation N-terminal domain protein n=2 Tax=Bifidobacterium RepID=A7A8S3_BIFAD
prepilin-type cleavage/methylation-like protein
Prepilin-type cleavage/methylation-like protein {ECO:0000313|EMBL:AII76617.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L1_008_000M1_scaffold_397_28
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30336..30782
DNA (447bp) protein (149aa)
Prepilin-type cleavage/methylation N-terminal domain protein n=2 Tax=Bifidobacterium RepID=C0BSE6_9BIFI
Prepilin-type N-terminal cleavage/methylation domain-containing protein {ECO:0000313|EMBL:KFI97602.1}; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
Type IV pilin PilA
L1_008_000M1_scaffold_397_29
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30880..32154
DNA (1275bp) protein (425aa)
Bacterial type II secretion system domain protein F n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5GZ23_9BIFI
Type IV pilus biogenesis protein PilC {ECO:0000313|EMBL:KFI97603.1}; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
Type IV fimbrial assembly protein PilC
L1_008_000M1_scaffold_397_30
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

32206..34623
DNA (2418bp) protein (806aa)
Uncharacterized protein n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5GL84_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:AJE06269.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
hypothetical protein
Displaying items 1-30 of 63 in total

View Taxonomy