ggKbase home page

L1_008_000M1_scaffold_57_39

Organism: L1_008_000M1_public_UNK

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 20 / 38 MC: 16
Location: comp(44704..45465)

Top 3 Functional Annotations

Value Algorithm Source
23S rRNA pseudouridylate synthase n=1 Tax=Bifidobacterium bifidum RepID=UPI0001976BE5 similarity UNIREF
DB: UNIREF100
  • Identity: 98.4
  • Coverage: 253.0
  • Bit_score: 522
  • Evalue 1.40e-145
ribosomal large subunit pseudouridine synthase D similarity KEGG
DB: KEGG
  • Identity: 98.8
  • Coverage: 253.0
  • Bit_score: 522
  • Evalue 5.30e-146
Ribosomal large subunit pseudouridine synthase D {ECO:0000313|EMBL:EKE51606.1}; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.4
  • Coverage: 253.0
  • Bit_score: 520
  • Evalue 7.60e-145

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Bifidobacterium bifidum → Bifidobacterium → Bifidobacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 762
TTGGACAGACCGCACCGGTGGGTGAGTGAGGAGCCCCATATCCCGTTCGATATCGACGTGGTGTATGAGGATGCCGGCATCATCGTCATCGACAAGCCGCATTTCCTCGCGACGACCCCGCGCGGCATGTGGTATCGGCAGACCGCGCTGATTCGGCTTCGCGAGATGTTCGACGAGCCGGACATCACGCCCGCGCATCGGCTGGACCGGCTCACCGCCGGCATCGTCGTGTTCGTGAGGGATCCAGCGCTGCGGGGCGCATACCAGATGATGTTCCAGGGCCGGAAGATCAGCAAGACCTACGAATGCCTGGCTCCGTGCCGGCCGACGACACGGCCGCGATACGGCACCGTCGAGCGGCTGGACCCTCCTGTCGTGTTCCCGCTGCGCCGACGTTCGCACATCACCAAGCTGCGTGGCGTGCTGCAGGCGTTCGAGGAGCCGCAGACCGTCAATGCCGAGACGGTGATCGATCTCGCGGCGGGAGGATATCCCTCGATGGGCGGGCGCTTATGCCACGGGAGGAACGGTCTGCGCGCCTACGAGCTGCACCCGCTCACCGGCAAGACCCATCAGCTGCGCGTGCACATGAACTCGATAGGGGTGCCGATCCATGGCGATGATTTCTATCCGCGTATCGTCGAACGCGCCTATGACGACTTCTCCACGCCGCTGGAACTGGTCGCGCGGTCATTGCGCTTCACCGACCCCGTCAGCGGGGAGCCGCGCGAATTCATCTCCCGCATACCTCTGGGTTGGTGA
PROTEIN sequence
Length: 254
LDRPHRWVSEEPHIPFDIDVVYEDAGIIVIDKPHFLATTPRGMWYRQTALIRLREMFDEPDITPAHRLDRLTAGIVVFVRDPALRGAYQMMFQGRKISKTYECLAPCRPTTRPRYGTVERLDPPVVFPLRRRSHITKLRGVLQAFEEPQTVNAETVIDLAAGGYPSMGGRLCHGRNGLRAYELHPLTGKTHQLRVHMNSIGVPIHGDDFYPRIVERAYDDFSTPLELVARSLRFTDPVSGEPREFISRIPLGW*