ggKbase home page

L1_008_000M1_scaffold_80_18

Organism: L1_008_000M1_public_UNK

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 20 / 38 MC: 16
Location: 20197..23115

Top 3 Functional Annotations

Value Algorithm Source
S1 RNA binding domain protein n=3 Tax=Bifidobacterium RepID=U2CDK0_BIFBI similarity UNIREF
DB: UNIREF100
  • Identity: 99.9
  • Coverage: 972.0
  • Bit_score: 1905
  • Evalue 0.0
S1 RNA binding domain protein {ECO:0000313|EMBL:ERI82610.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.9
  • Coverage: 972.0
  • Bit_score: 1905
  • Evalue 0.0
rne; ribonuclease, Rne/Rng family similarity KEGG
DB: KEGG
  • Identity: 99.7
  • Coverage: 960.0
  • Bit_score: 1879
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Bifidobacterium bifidum → Bifidobacterium → Bifidobacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 2919
GTGTGCGACGTGGTGCAGCACGTCGTGAGGAGTATCGTGCCTAGTGTGAACGATAACGGTTTCAGTCGTGACGAAACCGAAGAACAGCAGCCTACCCACGCCGATGCGGCCCAGTCGCCTGATTCGGCCGATAAAACGCCTGCGGCGCCGCGTCGTCGTCGCGGTGGCCGCCGCGTGGTTCGTGGCGCCGGTGCCGCCGGTGCCGCGGTCGCGCTGAAGGTCGAGGACCATTCCGCTCCGCTGTTCGCGGAACCCGTGGTGGAGCAGCCCCTTCCCCGTCGTCGCCGCTCGAAGGCGGCCGACGAATCGCCGGAGGCCAACGAGCCGGAGACCGCCGCATCGGCCGATTCCGAAAAGAAGGATGATGCGCGGCACGCCAAGGCCGACGGCAAGTCTCGGTCCGCGTCGCGCTCCTCGAAAGCGACGAAGCGCCATGACGATGACGCCGATCAGGCCGAACCCCGGCGCACCCGCGTGCGTCGTCGCACCGCCATGTTCTCCTCGCGCGAGGACGCTTCGCCGGCCGTTCCGGGCGAGCCGTCGGATGACGACCTCGGCGTCGATACCGGCACCGATATCATCGTCCGCGATGATTCCGCCGATCTGTCCCGCGCCCTGGATGTCGTTAGCACGCTGCCGCAACCTGCGCCGCGCGCTCACGCGATGACGTCCGTGCTGTTCCAGGAGCCGGTGCTGCCCGTGCCGGAAATCGTGCGCGACGCGCGCGATGACGACCGCGAGGATGACGACCGCGACAGCCGCGGCGGTGGCAAGTCCCGTCGCTCGCGCAATGGTCGTGTGTCACGTGACGGCGCGCAGGGGGACAAGGACAAGAGCGCTTCCTCCCGTCGCGATATCGACGGTCTGAGCCACATCGAGCGCGTCGACAGCTTCGATACCGACGACAGCCGCAGCCGTGACGAATCCGGCGAGGCCGACGAGCCGGTGCGTTCGTCGCGCCGCAACCGTCGCCTGAACGCGCAGGAGCGCCGTGCGGCCGCCGAAGTGGAGCAGATCGAGGAGGACCTGGAGCTCGACGGCATCTCCTATACGCCGGTCGACGACGAGGAGCCCTCCGAGGATTCGGGCACGAGATCCCGTCGCCGTCGCCGCTCCCGTCAGAACCGTGCCGACGACAGCCGCGGCAACGGCGAGTCGGACAGCAGCCAGTCCGCGGCGCAGCAGGATGAGCCAGCCAAGCCGTCGTCCCGCCGCACACGCGACGAGGAAGAAGACGATGACTCCAACGTCACCCGTCGCCGTCGCCGTCGCCGCTCCCGCGCGTCCGACGAGCAGGGTGACGATGAGATGACCGTGCGCCGCTCGCGCAAGCAGCAGTACATCGACGAGATCACCGACGTCGAGGGCTCCACCCGACTGGAGGCGAAGAAGCAGCGCCGCCGCGACAACCGCCGCGAGCGCAGCCGCCAGAGCCAGCTGGTCGAGCAGGACTTCCTCGCGCGCCGCGAGCACGTGAACCGTCTCATGGTGGTGCGCGAACGCGGCCATCACACGCAGATCTCCGTCATCGAGGACAACGTGCTCGTCGAGCATTACGTCTCCGACATCCAGGAGGTCGCCACGGTCGGCAACATCTACCTCGGCCGCGTGCAGAACGTGCTGCCGAGCATGGAGGCGGCGTTCGTCGACATCGGCCAGTCCCGCAACGGCGTGCTGTATGCCGGTGAGGTGAACTGGGACGCGACCCGCCTCGAAGGGCAGCCGCGCCGCATCGAGCTGGCGTTCAAATCTGGCGACCCGGTGCTCGTGCAGGTCACCAAGGATCCGATCGGCCACAAGGGCGCTCGCCTGACTTCGCAGGTCACGCTCGCCGGGCGTTTCCTGGTGCTCGTGCCGTCCGGCGGCATGACCGGCGTGAGCCGCAAGCTGAGCGAGCGCGAGCGTTCGCGCCTCAAGGGCATTGTCTCGAAGATCGCGCCGAAGGACATGGGCGTGATTATCCGCACCGCGGCCGAAGGTGCCAAGGAGGAGGCGATCGTCAAGGATCTGGAGAGCCTGGTCCGCCAGTGGGAGCGCATCAACGCCAAGCGCGAGGAGTTCTGGCACGGCAAGCGGCCGAAGCTGCTGCAGGGCGAGCCGGACGTCGCGATCCGCGTGGTGCGCGACATCTTCAACGACAATTTCGGCGAGCTAATCGTCGAGGGCGACAAGGTGTACGAGCGCATCGAGGAATACCTCGACACGATGGCGCCCGATCTCAAGGAGAAGTTGTCCAAGTGGGATCCGTCCGAGCATCAGGGCAAGGACGTGTTCGACAAGTGGCAGATCGACGCGCAGCTCAGGAAGGGCATGGAGCGTCAGGTGTACCTGCCTTCCGGTGGGTCGATCGTCATCGACCGCACCGAGGCCATGACCACGATCGACGTGAACACCGGCCGGTTCATCGGTCGCGGCAAGAGCCTTGAGGAGACGGTGACGCGATGCAACCTGGAGGCGGCCGAGGAGATCGCGCGCCAGCTGCGTCTGCGCGATATCGGCGGCATGGTCATGATCGATTTCGTCGACATGGTGATGCCCGCCAACCGCGATCTGGTGCTGCGGCGTCTGGTCGAATGCCTGGCGCGTGACCGCACCAAGCATCAGGTGGCGGAGGTCACGTCGCTGGGTCTGGTGCAGATGACGCGCAAGCGCATCGGCCAGGGCCTGGTCGAAGCGTTCTCCGAGGAGTGCCCGACCTGCCATGGCCGCGGGTTCATCTTGCATGACGAGCCGACCGTCAGCGCGGATTACGACGATCCGTATGCGCTCAAGGGTGGCGATCCGTTCATCAAGACCAACAAGCACGGCCGCGGTACGGATGTGCAGGTGCCGCAGGGCTCCTCGCCGGATATCAAGGCCAAGCTCGCGCAGATCGCCGCCGCGGCGGTCGCCGCGAACGGCACCGACGAGGATGAGTGA
PROTEIN sequence
Length: 973
VCDVVQHVVRSIVPSVNDNGFSRDETEEQQPTHADAAQSPDSADKTPAAPRRRRGGRRVVRGAGAAGAAVALKVEDHSAPLFAEPVVEQPLPRRRRSKAADESPEANEPETAASADSEKKDDARHAKADGKSRSASRSSKATKRHDDDADQAEPRRTRVRRRTAMFSSREDASPAVPGEPSDDDLGVDTGTDIIVRDDSADLSRALDVVSTLPQPAPRAHAMTSVLFQEPVLPVPEIVRDARDDDREDDDRDSRGGGKSRRSRNGRVSRDGAQGDKDKSASSRRDIDGLSHIERVDSFDTDDSRSRDESGEADEPVRSSRRNRRLNAQERRAAAEVEQIEEDLELDGISYTPVDDEEPSEDSGTRSRRRRRSRQNRADDSRGNGESDSSQSAAQQDEPAKPSSRRTRDEEEDDDSNVTRRRRRRRSRASDEQGDDEMTVRRSRKQQYIDEITDVEGSTRLEAKKQRRRDNRRERSRQSQLVEQDFLARREHVNRLMVVRERGHHTQISVIEDNVLVEHYVSDIQEVATVGNIYLGRVQNVLPSMEAAFVDIGQSRNGVLYAGEVNWDATRLEGQPRRIELAFKSGDPVLVQVTKDPIGHKGARLTSQVTLAGRFLVLVPSGGMTGVSRKLSERERSRLKGIVSKIAPKDMGVIIRTAAEGAKEEAIVKDLESLVRQWERINAKREEFWHGKRPKLLQGEPDVAIRVVRDIFNDNFGELIVEGDKVYERIEEYLDTMAPDLKEKLSKWDPSEHQGKDVFDKWQIDAQLRKGMERQVYLPSGGSIVIDRTEAMTTIDVNTGRFIGRGKSLEETVTRCNLEAAEEIARQLRLRDIGGMVMIDFVDMVMPANRDLVLRRLVECLARDRTKHQVAEVTSLGLVQMTRKRIGQGLVEAFSEECPTCHGRGFILHDEPTVSADYDDPYALKGGDPFIKTNKHGRGTDVQVPQGSSPDIKAKLAQIAAAAVAANGTDEDE*