ggKbase home page

L1_008_000M1_scaffold_510_25

Organism: L1_008_000M1_public_UNK

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 20 / 38 MC: 16
Location: 25862..26638

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=4 Tax=Clostridiales RepID=D4N1F8_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 258.0
  • Bit_score: 507
  • Evalue 6.30e-141
RNA polymerase, sigma subunit, RpsG/SigG similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 258.0
  • Bit_score: 507
  • Evalue 1.80e-141
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 258.0
  • Bit_score: 507
  • Evalue 8.90e-141

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Lachnospiraceae bacterium CAG:25 → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 777
ATGGCACGAAAAAAAGTAGAAATCTGTGGCGTTAACACTTCTTCTCTCCCTTTACTTTCTGAAGAAGAAAAAGAAGATTTATTTGAGCGGATCGAGCAAGGTGATCTTCTTGCCAGAGAACATTATATCAAAGGAAATCTACGACTTGTTCTCAGTATCATCCAACGATTTTCAGGAAGTAATGAAAATGCAGATGATCTTTTTCAAGTTGGCTGCATCGGTCTTATGAAAGCTATTGATAATTTTGACCGGAATCTAAATGTGAAATTCTCTACTTATGCTGTTCCCATGATCATTGGTGAAGTCAAACGCTATCTTCGTGATAATCATAGTATGCGTGTAAGTCGTTCTCTTCGTGATACCGCATATAAAGCGATCAATGCAAGAGAAGTTCTTACCAAAAAATTAAATCATGAGCCTACGATCGACGTCATTGCAAAAGAAATCGATATGAAAAAAGAAGATGTCTTATTTGCACTTGATGCAATCGCAACCCCTCTTTCTCTTTATGAACCTGTTTATCAGGATGGAGGTGATACTCTTTACCTTATGGATCAGGTAAAAGATAAAAAAAACAAAGAAGATAGCTGGGTGGAATCCATTGCCTTAAAAGAAGCAATGGAACATCTTCCAGATCGAGAATATGATATTATCAAAATGCGATTCTTTGAAGGAAAAACACAAACAGAAGTTGCAGACGAAATCGCCATTTCTCAGGCACAAGTCAGCCGTCTGGAAAAAAACGCCCTAAAACACATGAAGAACCACTTAGTGTGA
PROTEIN sequence
Length: 259
MARKKVEICGVNTSSLPLLSEEEKEDLFERIEQGDLLAREHYIKGNLRLVLSIIQRFSGSNENADDLFQVGCIGLMKAIDNFDRNLNVKFSTYAVPMIIGEVKRYLRDNHSMRVSRSLRDTAYKAINAREVLTKKLNHEPTIDVIAKEIDMKKEDVLFALDAIATPLSLYEPVYQDGGDTLYLMDQVKDKKNKEDSWVESIALKEAMEHLPDREYDIIKMRFFEGKTQTEVADEIAISQAQVSRLEKNALKHMKNHLV*