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L1_008_000M1_scaffold_510

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Displaying items 1-30 of 43 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_510_1
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3..314)
DNA (312bp) protein (104aa)
Uncharacterized protein n=1 Tax=Anaerostipes hadrus DSM 3319 RepID=L1QC36_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EKY25529.1}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
hypothetical protein
L1_008_000M1_scaffold_510_2
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(465..1703)
DNA (1239bp) protein (413aa)
Uncharacterized protein n=1 Tax=Anaerostipes hadrus DSM 3319 RepID=L1QC28_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EKY25528.1}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
Bacterial Ig-like domain (group 2).
L1_008_000M1_scaffold_510_3
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1773..2267)
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium CAG:25 RepID=R5ZF82_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA32791.1}; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
hypothetical protein
L1_008_000M1_scaffold_510_4
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2296..3675)
DNA (1380bp) protein (460aa)
Peptidase, M56 family n=1 Tax=Anaerostipes hadrus DSM 3319 RepID=L1QCV1_9FIRM
Peptidase, M56 family {ECO:0000313|EMBL:EKY25525.1}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
Antirepressor regulating drug resistance, predicted signal transduction N-terminal membrane component
L1_008_000M1_scaffold_510_5
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3687..4064)
DNA (378bp) protein (126aa)
Predicted transcriptional regulator n=4 Tax=Clostridiales RepID=D4N1H9_9FIRM
Predicted transcriptional regulator
Transcriptional regulator, BlaI/MecI/CopY family {ECO:0000313|EMBL:EKY25524.1}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
L1_008_000M1_scaffold_510_6
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4282..5607)
DNA (1326bp) protein (442aa)
Transporter n=1 Tax=Lachnospiraceae bacterium CAG:25 RepID=R5Z7V2_9FIRM
Transporter {ECO:0000256|RuleBase:RU003732}; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
Na+-dependent transporters of the SNF family
L1_008_000M1_scaffold_510_7
unknown

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comp(5631..6461)
DNA (831bp) protein (277aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=B0NWY1_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL38722.1}; TaxID=245018 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SSC/2.;"
L1_008_000M1_scaffold_510_8
Lachnospiraceae bacterium 5_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6490..6714)
DNA (225bp) protein (75aa)
Predicted transcriptional regulator n=5 Tax=Clostridiales RepID=D4N1H6_9FIRM
Predicted transcriptional regulator
XRE family transcriptional regulator {ECO:0000313|EMBL:EFV17268.1}; TaxID=658089 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_63FAA.;"
L1_008_000M1_scaffold_510_9
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6729..7700)
DNA (972bp) protein (324aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium CAG:25 RepID=R5ZUN8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA32802.1}; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
hypothetical protein
L1_008_000M1_scaffold_510_10
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7883..10303)
DNA (2421bp) protein (807aa)
Phenylalanine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00103829}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00022425};; Phenylalanyl-tRNA synthetase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283}; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
phenylalanyl-tRNA synthetase beta subunit (EC:6.1.1.20)
Phenylalanine--tRNA ligase beta subunit n=1 Tax=Lachnospiraceae bacterium CAG:25 RepID=R5YZF6_9FIRM
L1_008_000M1_scaffold_510_11
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(10360..11379)
DNA (1020bp) protein (340aa)
phenylalanyl-tRNA synthetase, alpha subunit (EC:6.1.1.20)
Phenylalanine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00016813}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00089474};; Phenylalanyl-tRNA synthetase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
Phenylalanine--tRNA ligase alpha subunit n=5 Tax=Clostridiales RepID=D4N1H3_9FIRM
L1_008_000M1_scaffold_510_12
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11540..11689)
DNA (150bp) protein (50aa)
Uncharacterized protein n=1 Tax=Anaerostipes hadrus DSM 3319 RepID=L1QD41_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EKY25517.1}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
L1_008_000M1_scaffold_510_13
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11739..12620)
DNA (882bp) protein (294aa)
Putative membrane protein n=1 Tax=Lachnospiraceae bacterium CAG:25 RepID=R5Z1C3_9FIRM
Putative membrane protein {ECO:0000313|EMBL:CDA32805.1}; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
Permeases of the drug/metabolite transporter (DMT) superfamily
L1_008_000M1_scaffold_510_14
Clostridium sp. SS2/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12787..14877)
DNA (2091bp) protein (697aa)
PTS system, glucose-like IIB component {ECO:0000313|EMBL:EDS23234.1}; EC=2.7.1.69 {ECO:0000313|EMBL:EDS23234.1};; TaxID=411484 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. SS2/1.;"
PTS system, glucose-like IIB component n=2 Tax=Clostridiales RepID=B0NWX5_9CLOT
PTS system, glucose subfamily, IIA component
L1_008_000M1_scaffold_510_15
Clostridium sp. SS2/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14936..15871)
DNA (936bp) protein (312aa)
Mannose-6-phosphate isomerase, class I {ECO:0000313|EMBL:EDS23233.1}; EC=5.3.1.8 {ECO:0000313|EMBL:EDS23233.1};; TaxID=411484 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. SS2/1.;"
mannose-6-phosphate isomerase, type 1 (EC:5.3.1.8)
Mannose-6-phosphate isomerase, class I n=1 Tax=Clostridium sp. SS2/1 RepID=B0NWX4_9CLOT
L1_008_000M1_scaffold_510_16
unknown

Not on your lists

comp(15915..16301)
DNA (387bp) protein (129aa)
Uncharacterized protein conserved in bacteria n=4 Tax=Clostridiales RepID=D4N1G6_9FIRM
hypothetical protein
Uncharacterized protein conserved in bacteria {ECO:0000313|EMBL:CBL38711.1}; TaxID=245018 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SSC/2.;"
L1_008_000M1_scaffold_510_17
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16469..17383)
DNA (915bp) protein (305aa)
PTS system, mannose/fructose/sorbose family, IID component n=3 Tax=Lachnospiraceae RepID=L1QD36_9FIRM
PTS system mannose/fructose/sorbose family IID component {ECO:0000313|EMBL:CDA32809.1}; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
PTS system IID component, Man family (TC 4.A.6)
L1_008_000M1_scaffold_510_18
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17404..18201)
DNA (798bp) protein (266aa)
Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC n=6 Tax=Firmicutes RepID=D4N1G4_9FIRM
Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC
PTS system sorbose-specific iic component {ECO:0000313|EMBL:CDA32810.1}; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
L1_008_000M1_scaffold_510_19
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18234..19217)
DNA (984bp) protein (328aa)
Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB (EC:2.7.1.69)
Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB n=5 Tax=Clostridiales RepID=D4N1G3_9FIRM
Putative PTS system mannose-specific EIIAB component {ECO:0000313|EMBL:EKY25510.1}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
L1_008_000M1_scaffold_510_20
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19442..20272)
DNA (831bp) protein (277aa)
Transcription antiterminator LicT n=2 Tax=Clostridiales RepID=B0NWW8_9CLOT
Putative transcription antiterminator LicT {ECO:0000313|EMBL:EKY25508.1}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
licT; transcription antiterminator LicT
L1_008_000M1_scaffold_510_21
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20689..21558
DNA (870bp) protein (290aa)
Ribonuclease BN-like family protein n=3 Tax=Lachnospiraceae RepID=E5VIJ7_9FIRM
YihY family protein {ECO:0000313|EMBL:EKY25507.1}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
Predicted membrane protein
L1_008_000M1_scaffold_510_22
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21594..22814)
DNA (1221bp) protein (407aa)
6-phosphofructokinase (EC:2.7.1.11)
Pyrophosphate--fructose 6-phosphate 1-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_01978}; EC=2.7.1.90 {ECO:0000256|HAMAP-Rule:MF_01978};; 6-phosphofructokinase, pyrophosphate dependent {ECO:0000256|HAMAP-Rule:MF_01978}; PPi-dependent phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_01978}; Pyrophosphate-dependent 6-phosphofructose-1-kinase {ECO:0000256|HAMAP-Rule:MF_01978}; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
6-phosphofructokinase n=5 Tax=Clostridiales RepID=D4N1G1_9FIRM
L1_008_000M1_scaffold_510_23
Clostridium sp. SS2/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23009..24805
DNA (1797bp) protein (599aa)
Peptidase, M24 family {ECO:0000313|EMBL:EDS23224.1}; EC=3.4.-.- {ECO:0000313|EMBL:EDS23224.1};; TaxID=411484 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. SS2/1.;"
Xaa-Pro aminopeptidase (EC:3.4.11.9)
Xaa-Pro aminopeptidase n=4 Tax=Clostridiales RepID=D4N1G0_9FIRM
L1_008_000M1_scaffold_510_24
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24886..25824)
DNA (939bp) protein (313aa)
ABC transporter substrate-binding protein family 3 n=1 Tax=Lachnospiraceae bacterium CAG:25 RepID=R5ZFA2_9FIRM
ABC transporter, substrate-binding protein, family 3 {ECO:0000313|EMBL:EKY25503.1}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-)
L1_008_000M1_scaffold_510_25
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25862..26638
DNA (777bp) protein (259aa)
RNA polymerase sigma factor n=4 Tax=Clostridiales RepID=D4N1F8_9FIRM
RNA polymerase, sigma subunit, RpsG/SigG
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
L1_008_000M1_scaffold_510_26
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26651..27598)
DNA (948bp) protein (316aa)
Mg2+ and Co2+ transporters n=4 Tax=Clostridiales RepID=D4N1F7_9FIRM
Mg2+ and Co2+ transporters
CorA-like protein {ECO:0000313|EMBL:EKY25502.1}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
L1_008_000M1_scaffold_510_27
unknown

Not on your lists

comp(27726..28691)
DNA (966bp) protein (322aa)
Predicted dehydrogenases and related proteins n=2 Tax=Clostridiales RepID=D4N1F6_9FIRM
Predicted dehydrogenases and related proteins
Predicted dehydrogenases and related proteins {ECO:0000313|EMBL:CBL38701.1}; TaxID=245018 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SSC/2.;"
L1_008_000M1_scaffold_510_28
Clostridium sp. SS2/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28710..29327)
DNA (618bp) protein (206aa)
Ribose-5-phosphate isomerase {ECO:0000256|SAAS:SAAS00087684}; EC=5.3.1.6 {ECO:0000256|SAAS:SAAS00087684};; TaxID=411484 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. SS2/1.;"
Ribose 5-phosphate isomerase A n=1 Tax=Clostridium sp. SS2/1 RepID=B0NWW0_9CLOT
ribose 5-phosphate isomerase
L1_008_000M1_scaffold_510_29
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29465..29788
DNA (324bp) protein (108aa)
DNA-directed RNA polymerase subunit delta domain protein n=1 Tax=Anaerostipes hadrus DSM 3319 RepID=L1QC09_9FIRM
DNA-directed RNA polymerase subunit delta domain protein {ECO:0000313|EMBL:EKY25499.1}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
hypothetical protein
L1_008_000M1_scaffold_510_30
Lachnospiraceae bacterium 5_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29849..31360)
DNA (1512bp) protein (504aa)
Fibronectin type III domain-containing protein n=1 Tax=Lachnospiraceae bacterium 5_1_63FAA RepID=E5VIK7_9FIRM
Fibronectin type III domain-containing protein {ECO:0000313|EMBL:EFV17292.1}; TaxID=658089 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_63FAA.;"
Fibronectin type III domain.
Displaying items 1-30 of 43 in total

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