ggKbase home page

L1_008_000M1_scaffold_531_9

Organism: L1_008_000M1_public_UNK

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 20 / 38 MC: 16
Location: comp(10888..11430)

Top 3 Functional Annotations

Value Algorithm Source
Shikimate kinase {ECO:0000256|HAMAP-Rule:MF_00109}; Short=SK {ECO:0000256|HAMAP-Rule:MF_00109};; EC=2.7.1.71 {ECO:0000256|HAMAP-Rule:MF_00109};; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 54.0
  • Coverage: 163.0
  • Bit_score: 186
  • Evalue 2.40e-44
Shikimate kinase (EC:2.7.1.71) similarity KEGG
DB: KEGG
  • Identity: 49.7
  • Coverage: 175.0
  • Bit_score: 174
  • Evalue 1.50e-41
Shikimate kinase n=1 Tax=Roseburia sp. CAG:50 RepID=R5U7B6_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 54.0
  • Coverage: 163.0
  • Bit_score: 186
  • Evalue 1.70e-44

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Roseburia sp. CAG:50 → Roseburia → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 543
ATGAAAAAAAAGAGAAATATTTATTTGATCGGCTTTATGGGCGTTGGAAAGACAACCGTCTCAAAATATTTGAGGGAACTGACCGGATGGGAGGAAGTCGATACCGATAAGGTCATTGTCCGGAAAAAAAATATGGGGATTCCGGAAATTTTTGAAAAATATGGGGAAAACTATTTTAGAAATTTAGAAAGTCATATATTAGAGGACTATGCAAAAAAGGGGCAGCGGATCGTATCCTGTGGCGGTGGAATTATTTTACGGGAAAACAACCGGAAGCTGATGAAAAAAAGCGGCACCGTGATTTTGTTGAGTGCGACCCCGCAGACCATTTATGAAAACGTAAAAGACGGAAAAGATCGTCCGCTTTTAAATGGAAACATGAATCCTGACTATATTGGAAAGATGATGCAGGAAAGACAGCCGTATTATGAAAAAGCAAAAGATATCGAAATTGTTACGGATGAAAAAGCACCAAAGGATGTCGCATTCGAGATCATAGAGCGGCTGCAGATATCAATGGCAGGAAAAGAGGAAGAGGCATGA
PROTEIN sequence
Length: 181
MKKKRNIYLIGFMGVGKTTVSKYLRELTGWEEVDTDKVIVRKKNMGIPEIFEKYGENYFRNLESHILEDYAKKGQRIVSCGGGIILRENNRKLMKKSGTVILLSATPQTIYENVKDGKDRPLLNGNMNPDYIGKMMQERQPYYEKAKDIEIVTDEKAPKDVAFEIIERLQISMAGKEEEA*