ggKbase home page

L1_008_000M1_scaffold_1545_23

Organism: L1_008_000M1_public_UNK

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 20 / 38 MC: 16
Location: comp(20529..21158)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoE (Fragment) n=1 Tax=human gut metagenome RepID=K1TNI1_9ZZZZ similarity UNIREF
DB: UNIREF100
  • Identity: 98.6
  • Coverage: 146.0
  • Bit_score: 295
  • Evalue 4.00e-77
RNA polymerase sigma factor RpoE {ECO:0000313|EMBL:EKC71168.1}; Flags: Fragment;; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.6
  • Coverage: 146.0
  • Bit_score: 295
  • Evalue 5.60e-77
RNA polymerase sigma factor, sigma-70 family similarity KEGG
DB: KEGG
  • Identity: 43.5
  • Coverage: 168.0
  • Bit_score: 142
  • Evalue 7.20e-32

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

human gut metagenome

Sequences

DNA sequence
Length: 630
ATGCCGGGAGCATTTTTCGTATTAGTATACAGAAGCGCTTCCAACAAAGAAAGCGCGCCGGCAGATGAATGCGAAAGGAGGTGTGGGGCACTGAACCAAACAGATTTTACCCAGCTGATGCAGCAATACCAAAAACTGGTTTATACCGTTTGTTTGCAGTTTGTCCACAACCCCCACACCGCCGAGGATCTGACCCAGGATACCTTCCTTTCGGCATGGTCGTCCATTGACCGGTGCGAGCCCCAATACTATAAGCAATGGCTGGTGCGTGTGGCGGCCAACAAATGCAAGGACCACCTGAAAAGCTCCTGGGCGCGCAGGGTGGAGGCACAATCCGACGAAACGATGCCGGAACCACGCGGCACACCGCCGCCCGGCAGCGGCCTGCAAAGCGCAGAGCCGGACCCGCAGGATGAATTTATGCGCCAGACCGATGCCGCAGAGCTGGAAACGATGGTGCGCACCCTGCGTGAACCCTATGGCCGGGCCGCGGCCATGTATCTGCTGGACGGGCTGCCCGTGGCGGCCATAGCCCAAAAGCTGGGCCGCCCGGCACCCACTGTTCAGAACCAGCTGTTCCGCGCAAAAGCGATCCTGCGCAAACAGATCATGGAAAGGAGGCAGGAATAA
PROTEIN sequence
Length: 210
MPGAFFVLVYRSASNKESAPADECERRCGALNQTDFTQLMQQYQKLVYTVCLQFVHNPHTAEDLTQDTFLSAWSSIDRCEPQYYKQWLVRVAANKCKDHLKSSWARRVEAQSDETMPEPRGTPPPGSGLQSAEPDPQDEFMRQTDAAELETMVRTLREPYGRAAAMYLLDGLPVAAIAQKLGRPAPTVQNQLFRAKAILRKQIMERRQE*