ggKbase home page

L1_008_000M1_scaffold_1578_23

Organism: L1_008_000M1_public_UNK

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 20 / 38 MC: 16
Location: comp(15102..16013)

Top 3 Functional Annotations

Value Algorithm Source
Helix-turn-helix family protein n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7IA72_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 27.9
  • Coverage: 280.0
  • Bit_score: 107
  • Evalue 1.30e-20
Uncharacterized protein {ECO:0000313|EMBL:EWM54220.1}; TaxID=1341157 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus flavefaciens 007c.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 30.4
  • Coverage: 296.0
  • Bit_score: 114
  • Evalue 2.00e-22
Predicted transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 30.7
  • Coverage: 244.0
  • Bit_score: 86
  • Evalue 1.20e-14

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Ruminococcus flavefaciens → Ruminococcus → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 912
ATGAGCAAAAGAACAGGAAACGCATACGTTTCCAGCACTAGCATCCAATCACTGGAGAGCAAGTCAGCTGTTCACAGACCCCCGCAAGCATCTGCACGGGAGCAAGCCTTATCTTTCGGTGATGTTCTCCGCAAGTATCGATTGCTAAAAAAGGCAACTCTCCCAGAGCTTGCTGACCTTCTGGGAGTTTCCAGAAACACAATCATCAACTGGGAGAGCGACAAAACGAGACCCGACATTTCTGCGATTCAGACGCTTTGTCTACATCTGGACATTCCTTTATATGAGCTATTCGGCATCACTGGGGATACCAAGTCACATCTCTCCGCGCGCGAAACTTCCCTTCTGGATGGCTATCGGCAACTCAGCACTGTCAACCAGAATGTTGTTACCGCTATGGTCGACAAGATGTTGGAAGAAGAGCAAAACGCCTGCAACAGCTACCTCATCAACAACTTTTCTCTGCTTCCGCTGGAATCCACGCCTGCTGCCGCTGGTACTGGCTGCGCTTTCACAGACGCACCGCCAGAGTACCTATTTATAAAGAAGAACCGATACAGCACAAATGCGGATGCACTGATTCGCGTGTCAGGTGCAAGTATGGAGCCCCTCTATCATGACGGAGATTTGGTTTATGTCTGCTATACGCAGGCTGTGGAAGATGGAGACGATGTCATCTGCTCCACCGTAGACGGTGCTGTCATCAAACGACTTCATGACCATAAGGTCCATTCGTTGAACAAAGACTTGCCCTTCGGCAAAAAATCCGAGGACGATCATGTTGCTATCCTCGGTAAAGTGCTTGGTATAGCATCAGAAGATGAGTTCGCCTGCGATTCTGATGTCCCACGGCTTGAAGAATTAAAAGCTGCAGACGTCCGCGCCTTTAAGAAAAAATATGGATTACTATAA
PROTEIN sequence
Length: 304
MSKRTGNAYVSSTSIQSLESKSAVHRPPQASAREQALSFGDVLRKYRLLKKATLPELADLLGVSRNTIINWESDKTRPDISAIQTLCLHLDIPLYELFGITGDTKSHLSARETSLLDGYRQLSTVNQNVVTAMVDKMLEEEQNACNSYLINNFSLLPLESTPAAAGTGCAFTDAPPEYLFIKKNRYSTNADALIRVSGASMEPLYHDGDLVYVCYTQAVEDGDDVICSTVDGAVIKRLHDHKVHSLNKDLPFGKKSEDDHVAILGKVLGIASEDEFACDSDVPRLEELKAADVRAFKKKYGLL*