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L1_008_000M1_scaffold_2176_31

Organism: L1_008_000M1_public_UNK

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 20 / 38 MC: 16
Location: 25561..26340

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=2 Tax=root RepID=R5MY69_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 99.6
  • Coverage: 259.0
  • Bit_score: 508
  • Evalue 3.70e-141
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.6
  • Coverage: 259.0
  • Bit_score: 508
  • Evalue 5.20e-141
RNA polymerase, sigma subunit, RpsG/SigG similarity KEGG
DB: KEGG
  • Identity: 98.5
  • Coverage: 259.0
  • Bit_score: 501
  • Evalue 9.80e-140

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Taxonomy

Ruminococcus sp. CAG:17 → Ruminococcus → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 780
ATGGCACTGAATAAAGTTGAAATCTGCGGAGTAAATACCTCAACGCTTCCTGTTCTCAACCAGGAAGAAAAGGATGAACTCTTCAAAAGAATCAAAGCTGGCGATGAAGAAGCCAGAGAATTGTACATCAAAGGCAATCTGCGGCTTGTTTTAAGCGTGATCCGCCGTTTTCAGAACAGCAGTGAAAATCCAGATGACCTTTTTCAGATCGGCTGTATCGGCCTGATCAAAGCAATCGATAATTTTGATACCACCCTTCAGGTAAAGTTTTCTACCTATGCAGTTCCTATGATCGTCGGTGAGATCCGAAGATATCTCCGGGATAACAACAGCATACGGGTCAGCCGCTCTCTGCGGGATATCGCCTACAAAACCATCTACACCAGGGAAAACTATATGCGGCAGCATCTCAAAGAGCCTACCATCGCGGAGATCGCTGATGAGATCGGCATTGACAAGGAAATGATCGTCTATGCCATGGATGCGATCCAGAGCCCGGTGAGCCTTTTTGAGCCGGTGTATTCCGAAGGAGGAGATACTCTCTATGTCATGGATCAGATCAGCGACAAAAAGAACCGGGAGGAAAACTGGGTGGAAGATATTTCTCTCCGGGACGCCATGAACCGGCTGGGAGAACGGGAACGACACATTATTGATCTCCGCTTCTACGAAGGAAAAACCCAGATGGAAGTTGCCGATGAGATCGGGATCTCCCAGGCCCAGGTCAGCCGCCTGGAAAAACATGCCCTTCGCAGTATGCGGAATTATCTCAGGAATTAA
PROTEIN sequence
Length: 260
MALNKVEICGVNTSTLPVLNQEEKDELFKRIKAGDEEARELYIKGNLRLVLSVIRRFQNSSENPDDLFQIGCIGLIKAIDNFDTTLQVKFSTYAVPMIVGEIRRYLRDNNSIRVSRSLRDIAYKTIYTRENYMRQHLKEPTIAEIADEIGIDKEMIVYAMDAIQSPVSLFEPVYSEGGDTLYVMDQISDKKNREENWVEDISLRDAMNRLGERERHIIDLRFYEGKTQMEVADEIGISQAQVSRLEKHALRSMRNYLRN*