ggKbase home page

L1_008_000M1_scaffold_1334_1

Organism: L1_008_000M1_public_UNK

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 20 / 38 MC: 16
Location: 192..1064

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=1262796 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:343.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.0
  • Coverage: 290.0
  • Bit_score: 578
  • Evalue 2.70e-162
Pseudouridine synthase n=1 Tax=Clostridium sp. CAG:343 RepID=R6N2X0_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 99.0
  • Coverage: 290.0
  • Bit_score: 578
  • Evalue 1.90e-162
pseudouridine synthase similarity KEGG
DB: KEGG
  • Identity: 47.8
  • Coverage: 293.0
  • Bit_score: 254
  • Evalue 3.10e-65

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Clostridium sp. CAG:343 → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 873
ATGGAACTAACATATTTAGTAAAAAAAGATAACATATATAAAAATATAAATGAAATATTATCCTTAGAATTCAAGCTTTCAGCTCGTTTGGCTTCAAAATTAATTAGAAATAAAAAGATTTATAAAAACAATTTTATAGTTGATACTCGTGATCCAATAGCTTTTGGAGATACTATAATTATTAATTTAGATTTATTTGAAGATAATTCAAATATTATTCCATTAAAAATGAATTTAGACATTCTATATGAAGACGAATGGTTTTTAGTAGTTAATAAACCTGCTGGAATAGCTATTCATCCTTCTGTAACTCATTATAACAATTCATTATCTAATGGTATTAAATATTATTTTGATTTAATTAATTTACACAAAAAAATAAGGCCTGTGAATAGACTTGATTTTGATACTTCTGGTTTAGTCATTTTTGCAAAATGTGAATATATTCAAGAAATGTTTAGCAGGCAAATGGCAAATGGGGATTTTAAAAAATACTATTTATGTATTGTTGATGGTACCTTAAGTAAAAAATCTGGCATTATTGATTTACCTATTGCAAGAAAAAAAGATAGTATCATTGAAAGATGTATTAGTGTTGATGGTCAAACCTCTATTACTAATTACAGAGTCTTAAAAGAATCTCACAATATTTCTTTAATACAATGTAAATTAGAAACTGGTAGAACTCATCAAATTAGAGTTCATATGCAAGCATTAGGTCATCCTATTATTGGTGATACATTATATGGTAATAAATCTTCTTTAATTAACAGACAAGCTTTGCATAGCTATAAAATAGAATGTATTCATCCAGTGACTTATAAAAAAATTGAATTTCTTTCCGAATTACCAAAAGATATGCAAATATTATAA
PROTEIN sequence
Length: 291
MELTYLVKKDNIYKNINEILSLEFKLSARLASKLIRNKKIYKNNFIVDTRDPIAFGDTIIINLDLFEDNSNIIPLKMNLDILYEDEWFLVVNKPAGIAIHPSVTHYNNSLSNGIKYYFDLINLHKKIRPVNRLDFDTSGLVIFAKCEYIQEMFSRQMANGDFKKYYLCIVDGTLSKKSGIIDLPIARKKDSIIERCISVDGQTSITNYRVLKESHNISLIQCKLETGRTHQIRVHMQALGHPIIGDTLYGNKSSLINRQALHSYKIECIHPVTYKKIEFLSELPKDMQIL*