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L1_008_000M1_scaffold_1194

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_1194_1
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3..473)
DNA (471bp) protein (157aa)
heat shock protein 90 n=1 Tax=Clostridium sporosphaeroides RepID=UPI00036CA87B
Chaperone protein HtpG {ECO:0000256|HAMAP-Rule:MF_00505, ECO:0000256|SAAS:SAAS00218406}; Heat shock protein HtpG {ECO:0000256|HAMAP-Rule:MF_00505}; High temperature protein G {ECO:0000256|HAMAP-Rule:MF_00505}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
Molecular chaperone, HSP90 family
L1_008_000M1_scaffold_1194_2
Clostridium sp. CAG:1013, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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834..1799
DNA (966bp) protein (322aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:1013 RepID=R5A9R6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX38624.1}; TaxID=1262769 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1013.;"
L1_008_000M1_scaffold_1194_3
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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2074..2721
DNA (648bp) protein (216aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=G9YSN0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM45375.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
membrane protein
L1_008_000M1_scaffold_1194_4
Clostridium sp. CAG:964, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2752..3525
DNA (774bp) protein (258aa)
Type III pantothenate kinase {ECO:0000256|HAMAP-Rule:MF_01274}; EC=2.7.1.33 {ECO:0000256|HAMAP-Rule:MF_01274};; PanK-III {ECO:0000256|HAMAP-Rule:MF_01274}; Pantothenic acid kinase {ECO:0000256|HAMAP-Rule:MF_01274}; TaxID=1262848 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:964.;"
pantothenate kinase (EC:2.7.1.33)
Type III pantothenate kinase n=1 Tax=Clostridium sp. CAG:964 RepID=R6U3J3_9CLOT
L1_008_000M1_scaffold_1194_5
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3666..4475
DNA (810bp) protein (270aa)
Putative membrane protein n=1 Tax=Clostridium sp. D5 RepID=F0Z2R0_9CLOT
Putative membrane protein {ECO:0000313|EMBL:EGB91735.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
hypothetical protein
L1_008_000M1_scaffold_1194_6
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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4568..5839
DNA (1272bp) protein (424aa)
Tetratricopeptide repeat protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YTY4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF53682.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
hypothetical protein
L1_008_000M1_scaffold_1194_7
Cellulosilyticum lentocellum, Cellulosilyticum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6134..8173)
DNA (2040bp) protein (680aa)
Uncharacterized protein n=1 Tax=Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) RepID=F2JKP2_CELLD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADZ83295.1}; TaxID=642492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Cellulosilyticum.;" source="Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB; 11756 / RHM5) (Clostridium lentocellum).;"
L1_008_000M1_scaffold_1194_8
[Clostridium] methylpentosum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8163..8930)
DNA (768bp) protein (256aa)
ABC transporter, ATP-binding protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0ECK3_9CLOT
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EEG30819.1}; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] methylpentosum DSM 5476.;"
hypothetical protein
L1_008_000M1_scaffold_1194_9
[Clostridium] methylpentosum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9026..10060)
DNA (1035bp) protein (345aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] methylpentosum DSM 5476.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0ECJ9_9CLOT
signal transduction histidine kinase
L1_008_000M1_scaffold_1194_10
[Clostridium] methylpentosum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10057..10719)
DNA (663bp) protein (221aa)
Response regulator receiver domain protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0ECJ8_9CLOT
Response regulator receiver domain protein {ECO:0000313|EMBL:EEG30814.1}; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] methylpentosum DSM 5476.;"
two component transcriptional regulator, winged helix family
L1_008_000M1_scaffold_1194_11
BJP_IG2069_Clostridiales_48_15, Clostridiales, Clostridia, Firmicutes, Bacteria

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11208..11933
DNA (726bp) protein (242aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:403 RepID=R7GXG0_9FIRM
hypothetical protein
Tax=BJP_IG2069_Clostridiales_48_15
L1_008_000M1_scaffold_1194_12
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12217..12984)
DNA (768bp) protein (256aa)
amino acid ABC transporter ATP-binding protein, PAAT family (TC 3.A.1.3.-) (EC:3.6.3.21)
ABC transporter, ATP-binding protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VW27_9CLOT
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDO59974.1}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
L1_008_000M1_scaffold_1194_13
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12998..13657)
DNA (660bp) protein (220aa)
ABC transporter, permease protein n=2 Tax=Clostridium RepID=A7VW28_9CLOT
ABC transporter permease protein {ECO:0000313|EMBL:CDC04490.1}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
amine acid ABC transporter permease
L1_008_000M1_scaffold_1194_14
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13900..14835)
DNA (936bp) protein (312aa)
ABC transporter, substrate-binding protein, family 3 n=2 Tax=Clostridium RepID=A7VW29_9CLOT
ABC transporter, substrate-binding protein, family 3 {ECO:0000313|EMBL:EDO59976.1}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
family 3 extracellular solute-binding protein
L1_008_000M1_scaffold_1194_15
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15057..16172
DNA (1116bp) protein (372aa)
Sporulation integral membrane protein YtvI n=1 Tax=Clostridium sp. MSTE9 RepID=J1H058_9CLOT
Sporulation integral membrane protein YtvI {ECO:0000313|EMBL:EJF38598.1}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
ytvI; sporulation integral membrane protein YtvI
L1_008_000M1_scaffold_1194_16
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16345..16719
DNA (375bp) protein (125aa)
Transcriptional regulator n=1 Tax=Clostridium sp. MSTE9 RepID=J0WPZ4_9CLOT
Transcriptional regulator {ECO:0000313|EMBL:EJF38521.1}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
GntR family transcriptional regulator
L1_008_000M1_scaffold_1194_17
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16716..17615
DNA (900bp) protein (300aa)
ABC transporter n=1 Tax=Clostridium sporosphaeroides RepID=UPI0003721031
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EJF38536.1}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
ABC-type multidrug transport system, ATPase component
L1_008_000M1_scaffold_1194_18
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17590..19452
DNA (1863bp) protein (621aa)
Uncharacterized protein n=1 Tax=Clostridium sp. MSTE9 RepID=J1GZJ3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EJF38565.1}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
hypothetical protein
L1_008_000M1_scaffold_1194_19
unknown

Not on your lists

comp(19383..19583)
DNA (201bp) protein (67aa)

This feature has no annotations

L1_008_000M1_scaffold_1194_20
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19599..20348)
DNA (750bp) protein (250aa)
ABC transporter, ATP-binding protein n=1 Tax=Clostridium sp. MSTE9 RepID=J0WXG6_9CLOT
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EJF41011.1}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
hypothetical protein
L1_008_000M1_scaffold_1194_21
Desulfitobacterium dichloroeliminans, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(20365..21150)
DNA (786bp) protein (262aa)
ABC-type polysaccharide/polyol phosphate export systems, permease component n=1 Tax=Desulfitobacterium dichloroeliminans (strain LMG P-21439 / DCA1) RepID=L0F9U7_DESDL
polysaccharide/polyol phosphate ABC transporter permease
Transport permease protein {ECO:0000256|RuleBase:RU361157}; Flags: Precursor;; TaxID=871963 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfitobacterium.;" source="Desulfitobacterium dichloroeliminans (strain LMG P-21439 / DCA1).;"
L1_008_000M1_scaffold_1194_22
Desulfitobacterium dichloroeliminans, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21167..22054)
DNA (888bp) protein (296aa)
Uncharacterized protein n=1 Tax=Desulfitobacterium dichloroeliminans (strain LMG P-21439 / DCA1) RepID=L0FBJ7_DESDL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA70582.1}; TaxID=871963 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfitobacterium.;" source="Desulfitobacterium dichloroeliminans (strain LMG P-21439 / DCA1).;"
L1_008_000M1_scaffold_1194_23
Firmicutes bacterium CAG:227, Firmicutes, Bacteria

Not on your lists

comp(22331..22744)
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:227 RepID=R6V524_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC92100.1}; TaxID=1263010 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:227.;"
hypothetical protein
L1_008_000M1_scaffold_1194_24
Blautia sp. CAG:37, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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23193..24173
DNA (981bp) protein (327aa)
Transcriptional regulators n=1 Tax=Blautia sp. CAG:37 RepID=R7JLY1_9FIRM
Transcriptional regulators {ECO:0000313|EMBL:CDE64925.1}; TaxID=1262757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:37.;"
Transcriptional regulators
L1_008_000M1_scaffold_1194_25
Blautia sp. CAG:37, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24456..26339
DNA (1884bp) protein (628aa)
Glycosidases (EC:2.4.1.4)
Uncharacterized protein n=1 Tax=Blautia sp. CAG:37 RepID=R7JMU0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE64923.1}; TaxID=1262757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:37.;"
Displaying 25 items

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