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L1_008_000M1_scaffold_1439

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Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_1439_1
Paenibacillus durus, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(3..644)
DNA (642bp) protein (214aa)
Uncharacterized protein n=1 Tax=Bacillus cereus VD118 RepID=R8Q7M9_BACCE
glycosyl transferase family 1
Glycosyl transferase family 1 {ECO:0000313|EMBL:AKG33411.1}; TaxID=1333534 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus durus ATCC 35681.;"
L1_008_000M1_scaffold_1439_2
Bacillus sp. 1NLA3E, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(656..1720)
DNA (1065bp) protein (355aa)
Glycosyltransferase n=1 Tax=Bacillus sp. 1NLA3E RepID=N0AX96_9BACI
glycosyltransferase
Glycosyltransferase {ECO:0000313|EMBL:AGK52650.1}; TaxID=666686 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus sp. 1NLA3E.;"
L1_008_000M1_scaffold_1439_3
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2198..3253
DNA (1056bp) protein (352aa)
Putative peptidase S10 Flavivirus NS3 serine protease n=1 Tax=Clostridium leptum CAG:27 RepID=R6P281_9CLOT
Putative peptidase S10 Flavivirus NS3 serine protease {ECO:0000313|EMBL:CDC04062.1}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
DnaD and phage-associated domain
L1_008_000M1_scaffold_1439_4
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3269..4267
DNA (999bp) protein (333aa)
DNA replication protein DnaC n=1 Tax=Clostridium leptum CAG:27 RepID=R6MWH9_9CLOT
DNA replication protein DnaC {ECO:0000313|EMBL:CDC04063.1}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
DNA replication protein
L1_008_000M1_scaffold_1439_5
Veillonella sp. CAG:933, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(4337..5176)
DNA (840bp) protein (280aa)
peptidase M23 id=3680878 bin=GWF2_Bacteroidetes_35_48 species=Marinilabilia salmonicolor genus=Marinilabilia taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_35_48 organism_group=Bacteroidetes organism_desc=a81
Membrane proteins related to metalloendopeptidases
Peptidase M23 family {ECO:0000313|EMBL:CCX56815.1}; TaxID=1262980 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella; environmental samples.;" source="Veillonella sp. CAG:933.;"
L1_008_000M1_scaffold_1439_6
Lachnoanaerobaculum sp. MSX33, Lachnoanaerobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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5467..5910
DNA (444bp) protein (148aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium ICM7 RepID=J5GNF4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETO95874.1}; TaxID=936596 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Lachnoanaerobaculum.;" source="Lachnoanaerobaculum sp. MSX33.;"
thioesterase
L1_008_000M1_scaffold_1439_7
Clostridium sp. CAG:242, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6050..7150
DNA (1101bp) protein (367aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:242 RepID=R6CYD0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA76561.1}; TaxID=1262783 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:242.;"
ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components
L1_008_000M1_scaffold_1439_8
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7329..7943
DNA (615bp) protein (205aa)
hypothetical protein n=1 Tax=Clostridium sporosphaeroides RepID=UPI0003771696
ABC transporter, permease protein {ECO:0000313|EMBL:EJF42115.1}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
hypothetical protein
L1_008_000M1_scaffold_1439_9
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

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7909..8493
DNA (585bp) protein (195aa)
ABC transporter related n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5B494_9FIRM
ABC transporter related {ECO:0000313|EMBL:CCX46311.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
Fe(3+)-transporting ATPase
L1_008_000M1_scaffold_1439_10
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8620..9288)
DNA (669bp) protein (223aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=A7VYD5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDO59563.1}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
Predicted membrane protein
L1_008_000M1_scaffold_1439_11
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9395..9670
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Clostridium sp. MSTE9 RepID=J1H0R3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EJF38793.1}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
hypothetical protein
L1_008_000M1_scaffold_1439_12
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9789..10058
DNA (270bp) protein (90aa)
sigmaK-factor processing regulatory protein BofA n=1 Tax=Clostridium sporosphaeroides RepID=UPI0003655646
SigmaK-factor processing regulatory protein BofA {ECO:0000313|EMBL:EJF38820.1}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
sigmaK-factor processing regulatory BofA
L1_008_000M1_scaffold_1439_13
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10118..10705)
DNA (588bp) protein (196aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=A7VVK4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC03460.1}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
hypothetical protein
L1_008_000M1_scaffold_1439_14
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10789..11175)
DNA (387bp) protein (129aa)
hypothetical protein n=1 Tax=Clostridium sporosphaeroides RepID=UPI00036932D7
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EJF38808.1}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
Transcriptional regulator, Cro/CI family
L1_008_000M1_scaffold_1439_15
Anaerotruncus sp. G3(2012), Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12525..13358
DNA (834bp) protein (278aa)
Uncharacterized protein n=2 Tax=Anaerotruncus sp. G3(2012) RepID=R9LI42_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS58385.1}; TaxID=1235835 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus sp. G3(2012).;"
integrase family protein
L1_008_000M1_scaffold_1439_16
Anaerotruncus sp. G3(2012), Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13678..14610
DNA (933bp) protein (311aa)
Uncharacterized protein n=1 Tax=Anaerotruncus sp. G3(2012) RepID=R9LHZ1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS58384.1}; TaxID=1235835 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus sp. G3(2012).;"
Site-specific recombinase XerD
L1_008_000M1_scaffold_1439_17
Dorea sp. CAG:105, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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14607..15674
DNA (1068bp) protein (356aa)
Glycosyltransferases involved in cell wall biogenesis n=1 Tax=Dorea sp. CAG:105 RepID=R5D3Q0_9FIRM
Glycosyltransferases involved in cell wall biogenesis {ECO:0000313|EMBL:CCX73409.1}; TaxID=1262872 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:105.;"
Glycosyltransferases involved in cell wall biogenesis
L1_008_000M1_scaffold_1439_18
Bacteroides cellulosilyticus CAG:158, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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15697..16686
DNA (990bp) protein (330aa)
Uncharacterized protein n=1 Tax=Bacteroides cellulosilyticus CAG:158 RepID=R6LFH8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDB72972.1}; TaxID=1263038 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides cellulosilyticus CAG:158.;"
putative glycosyltransferase
L1_008_000M1_scaffold_1439_19
Eubacterium siraeum CAG:80, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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16683..17480
DNA (798bp) protein (266aa)
LICD family protein n=1 Tax=Eubacterium siraeum CAG:80 RepID=R6REN6_9FIRM
LICD family protein {ECO:0000313|EMBL:CDC47363.1}; TaxID=1263080 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium siraeum CAG:80.;"
LicD family protein
L1_008_000M1_scaffold_1439_20
Eubacterium siraeum CAG:80, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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17485..17874
DNA (390bp) protein (130aa)
Glycerol-3-phosphate cytidylyltransferase (EC:2.7.7.39)
Glycerol-3-phosphate cytidylyltransferase n=1 Tax=Eubacterium siraeum CAG:80 RepID=R6RPS7_9FIRM
Glycerol-3-phosphate cytidylyltransferase {ECO:0000313|EMBL:CDC47364.1}; TaxID=1263080 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium siraeum CAG:80.;"
L1_008_000M1_scaffold_1439_21
Anaerostipes caccae, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

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17907..20555
DNA (2649bp) protein (883aa)
CDP-glycerol:poly(Glycerophosphate) glycerophosphotransferase n=1 Tax=Anaerostipes caccae DSM 14662 RepID=B0M981_9FIRM
CDP-glycerol:poly(Glycerophosphate) glycerophosphotransferase {ECO:0000313|EMBL:EDR99342.1}; TaxID=411490 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes caccae DSM 14662.;"
glycosyl transferases group 1 family protein
L1_008_000M1_scaffold_1439_22
Lactococcus lactis, Lactococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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20601..22187
DNA (1587bp) protein (529aa)
Uncharacterized protein n=1 Tax=Lactococcus lactis subsp. lactis Dephy 1 RepID=U6EQC7_LACLL
Uncharacterized protein {ECO:0000313|EMBL:CDI46863.1}; TaxID=1390360 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Lactococcus.;" source="Lactococcus lactis subsp. lactis Dephy 1.;"
polysaccharide biosynthesis protein
L1_008_000M1_scaffold_1439_23
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22206..23189
DNA (984bp) protein (328aa)
Uncharacterized protein n=1 Tax=Erysipelotrichaceae bacterium 5_2_54FAA RepID=U5F6G3_9FIRM
DNDP-4-keto-6-deoxy-glucose-2,3-dehydratase {ECO:0000313|EMBL:KIL08037.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
NDP-hexose 2,3-dehydratase
L1_008_000M1_scaffold_1439_24
Desulfosporosinus meridiei, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

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23149..23547
DNA (399bp) protein (133aa)
NDP-hexose 2,3-dehydratase n=1 Tax=Desulfosporosinus meridiei (strain ATCC BAA-275 / DSM 13257 / NCIMB 13706 / S10) RepID=J7J4R7_DESMD
NDP-hexose 2,3-dehydratase
NDP-hexose 2,3-dehydratase {ECO:0000313|EMBL:AFQ45936.1}; TaxID=768704 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus meridiei (strain ATCC BAA-275 / DSM 13257 / NCIMB; 13706 / S10).;"
L1_008_000M1_scaffold_1439_25
Bacteroides intestinalis CAG:315, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23550..24575
DNA (1026bp) protein (342aa)
NAD binding oxidoreductase n=1 Tax=Bacteroides intestinalis CAG:315 RepID=R7E426_9BACE
NAD binding oxidoreductase {ECO:0000313|EMBL:CDD97644.1}; TaxID=1263048 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides intestinalis CAG:315.;"
hypothetical protein
L1_008_000M1_scaffold_1439_26
Peptostreptococcaceae bacterium ACC19a, Clostridiales, Clostridia, Firmicutes, Bacteria

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24566..25129
DNA (564bp) protein (188aa)
dTDP-4-dehydrorhamnose 3,5-epimerase n=1 Tax=Eubacteriaceae bacterium ACC19a RepID=G9X0B1_9FIRM
dTDP-4-dehydrorhamnose 3,5-epimerase {ECO:0000313|EMBL:EHL15458.1}; TaxID=796937 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae.;" source="Peptostreptococcaceae bacterium ACC19a.;"
Putative dTDP-6-deoxy-D-glucose-3,5-epimerase
L1_008_000M1_scaffold_1439_27
Photobacterium leiognathi, Photobacterium, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

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25126..26043
DNA (918bp) protein (306aa)
NAD dependent epimerase/dehydratase family protein n=1 Tax=Photobacterium leiognathi subsp. mandapamensis svers.1.1. RepID=F2P9R3_PHOMO
NAD dependent epimerase/dehydratase family protein {ECO:0000313|EMBL:GAA04684.1}; TaxID=1001530 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Photobacterium.;" source="Photobacterium leiognathi subsp. mandapamensis svers.1.1.;"
NAD-dependent epimerase/dehydratase
L1_008_000M1_scaffold_1439_28
Eubacterium sp. CAG:786, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26101..26979
DNA (879bp) protein (293aa)
Glucose-1-phosphate thymidylyltransferase {ECO:0000256|RuleBase:RU003706}; EC=2.7.7.24 {ECO:0000256|RuleBase:RU003706};; TaxID=1262893 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:786.;"
Glucose-1-phosphate thymidylyltransferase n=1 Tax=Eubacterium sp. CAG:786 RepID=R5GJF2_9FIRM
glucose-1-phosphate thymidylyltransferase
L1_008_000M1_scaffold_1439_29
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26976..28031
DNA (1056bp) protein (352aa)
dTDP-glucose 4,6-dehydratase {ECO:0000256|RuleBase:RU004473}; EC=4.2.1.46 {ECO:0000256|RuleBase:RU004473};; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
dTDP-glucose 4,6-dehydratase (EC:4.2.1.46)
dTDP-glucose 4,6-dehydratase n=1 Tax=Clostridium sp. MSTE9 RepID=J0N8Z1_9CLOT
L1_008_000M1_scaffold_1439_30
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28744..29898)
DNA (1155bp) protein (385aa)
Site-specific recombinase, phage integrase family n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2BK56_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KGF56374.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
putative site-specific recombinase
Displaying items 1-30 of 34 in total

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