ggKbase home page

L1_008_000M1_scaffold_1572

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_1572_1
Clostridium sp. L2-50, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(113..577)
DNA (465bp) protein (155aa)
Uncharacterized protein n=1 Tax=Clostridium sp. L2-50 RepID=A7VDR3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDO58325.1}; TaxID=411489 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. L2-50.;"
hypothetical protein
L1_008_000M1_scaffold_1572_2
unknown

Not on your lists

comp(593..808)
DNA (216bp) protein (72aa)

This feature has no annotations

L1_008_000M1_scaffold_1572_3
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(839..1294)
DNA (456bp) protein (152aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=G9YSL0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF54392.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
hypothetical protein
L1_008_000M1_scaffold_1572_4
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1910..3661
DNA (1752bp) protein (584aa)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Clostridium sp. KLE 1755 RepID=U2BC15_9CLOT
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein {ECO:0000313|EMBL:ERI69715.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
HAMP domain-containing protein,histidine kinase
L1_008_000M1_scaffold_1572_5
unknown

Not on your lists

3994..4254
DNA (261bp) protein (87aa)

This feature has no annotations

L1_008_000M1_scaffold_1572_6
Clostridium sp. CAG:590, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4386..4745
DNA (360bp) protein (120aa)
Transcriptional regulator HTH-type n=1 Tax=Clostridium sp. CAG:590 RepID=R5EBF8_9CLOT
Transcriptional regulator HTH-type {ECO:0000313|EMBL:CCX86092.1}; TaxID=1262825 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:590.;"
putative Xre family DNA-binding protein
L1_008_000M1_scaffold_1572_7
Roseburia sp. CAG:303, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4947..5549)
DNA (603bp) protein (201aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:303 RepID=R7IPM9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE52612.1}; TaxID=1262944 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:303.;"
cytidylate kinase
L1_008_000M1_scaffold_1572_8
Oscillibacter sp. 1-3, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5539..10209)
DNA (4671bp) protein (1557aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. 1-3 RepID=R9M1M0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS64954.1}; TaxID=1235797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. 1-3.;"
GLUG domain-containing protein
L1_008_000M1_scaffold_1572_9
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

Not on your lists

comp(10199..12607)
DNA (2409bp) protein (803aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6LX77_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB88319.1}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
RND family transporter
L1_008_000M1_scaffold_1572_10
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12653..12955)
DNA (303bp) protein (101aa)
Uncharacterized protein n=2 Tax=Oscillibacter RepID=U2R3V9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK63214.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
L1_008_000M1_scaffold_1572_11
Firmicutes bacterium CAG:137, Firmicutes, Bacteria

Not on your lists

13152..13736
DNA (585bp) protein (195aa)
Transcriptional regulator TetR family n=1 Tax=Firmicutes bacterium CAG:137 RepID=R6H9H0_9FIRM
Transcriptional regulator TetR family {ECO:0000313|EMBL:CDB30201.1}; TaxID=1263004 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:137.;"
hypothetical protein
L1_008_000M1_scaffold_1572_12
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13932..15485)
DNA (1554bp) protein (518aa)
Hydantoinase/oxoprolinase n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CUH2_9CLOT
Hydantoinase/oxoprolinase {ECO:0000313|EMBL:EEG57172.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
hydantoinase/oxoprolinase
L1_008_000M1_scaffold_1572_13
BJP_IG2069_Clostridiales_48_15, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15488..16630)
DNA (1143bp) protein (381aa)
hypothetical protein n=1 Tax=Blautia producta RepID=UPI000369D434
hypothetical protein
Tax=BJP_IG2069_Clostridiales_48_15
L1_008_000M1_scaffold_1572_14
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16902..18491)
DNA (1590bp) protein (530aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9XI65_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY95618.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
hypothetical protein
L1_008_000M1_scaffold_1572_15
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18723..20795)
DNA (2073bp) protein (691aa)
Glycosyl hydrolase family 31 n=1 Tax=Clostridium leptum CAG:27 RepID=R6MUE4_9CLOT
Glycosyl hydrolase family 31 {ECO:0000313|EMBL:CDC03368.1}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
glycoside hydrolase family protein
L1_008_000M1_scaffold_1572_16
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20819..21373)
DNA (555bp) protein (185aa)
Cerebroside-sulfatase (EC:3.1.6.8)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7K2W9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN39231.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
Displaying 16 items

View Taxonomy