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L1_008_000M1_scaffold_1644

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_1644_1
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..1140)
DNA (1140bp) protein (380aa)
UDP-N-acetylmuramate--L-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00046, ECO:0000256|SAAS:SAAS00243344}; EC=6.3.2.8 {ECO:0000256|HAMAP-Rule:MF_00046, ECO:0000256|SAAS:SAAS00243344};; UDP-N-acetylmuramoyl-L-alanine synthetase {ECO:0000256|HAMAP-Rule:MF_00046}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
UDP-N-acetylmuramate--L-alanine ligase (EC:6.3.2.8)
UDP-N-acetylmuramate--alanine ligase n=1 Tax=Clostridium sporosphaeroides RepID=UPI000364358F
L1_008_000M1_scaffold_1644_2
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1424..2287
DNA (864bp) protein (288aa)
Putative dipicolinic acid synthetase, A subunit n=1 Tax=Clostridium sp. MSTE9 RepID=J0N6E5_9CLOT
Putative dipicolinic acid synthetase, A subunit {ECO:0000313|EMBL:EJF42414.1}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
NADP oxidoreductase coenzyme F420-dependent.
L1_008_000M1_scaffold_1644_3
Eubacterium sp. CAG:202, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2293..2874
DNA (582bp) protein (194aa)
Dipicolinic acid synthetase B subunit n=1 Tax=Eubacterium sp. CAG:202 RepID=R6NWS6_9FIRM
Dipicolinic acid synthetase B subunit {ECO:0000313|EMBL:CDC02187.1}; TaxID=1262884 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:202.;"
hypothetical protein
L1_008_000M1_scaffold_1644_4
Clostridium sp. CAG:1013, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3008..4282
DNA (1275bp) protein (425aa)
O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase n=1 Tax=Clostridium sp. CAG:1013 RepID=R5A9N8_9CLOT
O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase {ECO:0000313|EMBL:CCX38589.1}; TaxID=1262769 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1013.;"
O-acetylhomoserine (thiol)-lyase
L1_008_000M1_scaffold_1644_5
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4356..5117)
DNA (762bp) protein (254aa)
Thermostable monoacylglycerol lipase n=1 Tax=Clostridium leptum CAG:27 RepID=R6NB35_9CLOT
Thermostable monoacylglycerol lipase {ECO:0000313|EMBL:CDC03441.1}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
esterase/lipase
L1_008_000M1_scaffold_1644_6
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5433..6713
DNA (1281bp) protein (427aa)
Peptidase M16 inactive domain protein {ECO:0000313|EMBL:EJF39830.1}; EC=3.4.24.- {ECO:0000313|EMBL:EJF39830.1};; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
peptidase M16 n=1 Tax=Clostridium sporosphaeroides RepID=UPI00036912F3
Predicted Zn-dependent peptidases
L1_008_000M1_scaffold_1644_7
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6710..7990
DNA (1281bp) protein (427aa)
Peptidase, M16 family {ECO:0000313|EMBL:EJF40138.1}; EC=3.4.24.- {ECO:0000313|EMBL:EJF40138.1};; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
Peptidase, M16 family n=1 Tax=Clostridium sp. MSTE9 RepID=J1H4K4_9CLOT
Predicted Zn-dependent peptidases
L1_008_000M1_scaffold_1644_8
Clostridium sp. CAG:1013, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8069..9247
DNA (1179bp) protein (393aa)
Prolipoprotein diacylglyceryl transferase {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117220}; EC=2.4.99.- {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117311};; TaxID=1262769 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1013.;"
prolipoprotein diacylglyceryl transferase (EC:2.4.99.-)
Prolipoprotein diacylglyceryl transferase n=1 Tax=Clostridium sp. CAG:1013 RepID=R5A8T4_9CLOT
L1_008_000M1_scaffold_1644_9
Firmicutes bacterium CAG:94, Firmicutes, Bacteria

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9231..10088
DNA (858bp) protein (286aa)
methenyltetrahydrofolate cyclohydrolase/5,10-methylenetetrahydrofolate dehydrogenase (NADP+) (EC:1.5.1.5 3.5.4.9)
Bifunctional protein FolD n=1 Tax=Firmicutes bacterium CAG:94 RepID=R6YB41_9FIRM
Bifunctional protein FolD {ECO:0000256|HAMAP-Rule:MF_01576}; TaxID=1262989 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:94.;"
L1_008_000M1_scaffold_1644_10
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10125..12002
DNA (1878bp) protein (626aa)
1-deoxy-D-xylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00021618}; EC=2.2.1.7 {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897};; 1-deoxyxylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
dxs; 1-deoxy-D-xylulose-5-phosphate synthase (EC:2.2.1.7)
1-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Clostridium sp. MSTE9 RepID=J1H4D1_9CLOT
L1_008_000M1_scaffold_1644_11
Firmicutes bacterium CAG:94, Firmicutes, Bacteria

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11981..12802
DNA (822bp) protein (274aa)
Hemolysin TlyA family protein n=1 Tax=Firmicutes bacterium CAG:94 RepID=R6ZKY8_9FIRM
Hemolysin TlyA family protein {ECO:0000313|EMBL:CDD31112.1}; TaxID=1262989 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:94.;"
hemolysin A
L1_008_000M1_scaffold_1644_12
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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12799..13659
DNA (861bp) protein (287aa)
NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037468}; EC=2.7.1.23 {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037533};; ATP-dependent NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
Probable inorganic polyphosphate/ATP-NAD kinase n=2 Tax=Clostridium RepID=A7VX37_9CLOT
ATP-NAD/AcoX kinase
L1_008_000M1_scaffold_1644_13
Clostridium sp. CAG:1013, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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13660..14109
DNA (450bp) protein (150aa)
Arginine repressor n=1 Tax=Clostridium sp. CAG:1013 RepID=R5A8W0_9CLOT
Arginine repressor {ECO:0000256|HAMAP-Rule:MF_00173}; TaxID=1262769 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1013.;"
arginine repressor ArgR
L1_008_000M1_scaffold_1644_14
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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14116..15789
DNA (1674bp) protein (558aa)
DNA repair protein RecN n=1 Tax=Clostridium sporosphaeroides RepID=UPI000365D07D
DNA repair protein RecN {ECO:0000256|PIRNR:PIRNR003128}; Recombination protein N {ECO:0000256|PIRNR:PIRNR003128}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
recN; DNA repair protein RecN
L1_008_000M1_scaffold_1644_15
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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16207..17433
DNA (1227bp) protein (409aa)
Tyrosine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02006, ECO:0000256|SAAS:SAAS00105716}; EC=6.1.1.1 {ECO:0000256|HAMAP-Rule:MF_02006, ECO:0000256|SAAS:SAAS00105716};; Tyrosyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02006}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
tyrS; Tyrosine-tRNA ligase (EC:6.1.1.1)
Tyrosine--tRNA ligase n=2 Tax=Clostridium RepID=A7VX33_9CLOT
L1_008_000M1_scaffold_1644_16
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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17658..20351
DNA (2694bp) protein (898aa)
Bacterial membrane protein YfhO n=1 Tax=Clostridium sp. MSTE9 RepID=J1H4N4_9CLOT
Bacterial membrane protein YfhO {ECO:0000313|EMBL:EJF40173.1}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
yfhO; Bacterial membrane protein, YfhO family
Displaying 16 items

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