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L1_008_000M1_scaffold_1906

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_1906_1
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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267..3731
DNA (3465bp) protein (1155aa)
Uncharacterized protein n=1 Tax=Clostridium sp. MSTE9 RepID=J0NC20_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EJF42167.1}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
L1_008_000M1_scaffold_1906_2
unknown

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3967..4308
DNA (342bp) protein (114aa)

This feature has no annotations

L1_008_000M1_scaffold_1906_3
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4436..4909
DNA (474bp) protein (158aa)
hypothetical protein n=1 Tax=Clostridium sporosphaeroides RepID=UPI00036D5D82
Uncharacterized protein {ECO:0000313|EMBL:EJF41210.1}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
L1_008_000M1_scaffold_1906_4
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5014..5541)
DNA (528bp) protein (176aa)
Glycerol-3-phosphate dehydrogenase [NAD(P)+] {ECO:0000256|HAMAP-Rule:MF_00394}; EC=1.1.1.94 {ECO:0000256|HAMAP-Rule:MF_00394};; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00394}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
Glycerol-3-phosphate dehydrogenase [NAD(P)+] n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KLB2_9FIRM
NAD-dependent glycerol-3-phosphate dehydrogenase domain-containing protein
L1_008_000M1_scaffold_1906_5
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5688..7331)
DNA (1644bp) protein (548aa)
Na/Pi-cotransporter II-like protein n=2 Tax=Clostridiales RepID=G9YR46_9FIRM
Na/Pi-cotransporter II-like protein {ECO:0000313|EMBL:EHM50355.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
Na/Pi-cotransporter
L1_008_000M1_scaffold_1906_6
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

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7851..9359
DNA (1509bp) protein (503aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KGZ4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN33159.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
Beta-fructosidases (levanase/invertase)
L1_008_000M1_scaffold_1906_7
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9502..9813
DNA (312bp) protein (104aa)
Thioredoxin n=1 Tax=human gut metagenome RepID=K1SZH3_9ZZZZ
Thioredoxin {ECO:0000313|EMBL:EEU97908.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
thioredoxin
L1_008_000M1_scaffold_1906_8
Eubacterium limosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9992..10690)
DNA (699bp) protein (233aa)
Uncharacterized protein n=1 Tax=Eubacterium limosum (strain KIST612) RepID=E3GQW3_EUBLK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADO39405.1}; TaxID=903814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium limosum (strain KIST612).;"
L1_008_000M1_scaffold_1906_9
GWF2_Clostridiales_38_85_curated, Clostridiales, Bacteria

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comp(11352..12641)
DNA (1290bp) protein (430aa)
Putative uncharacterized protein id=2593105 bin=GWF2_Clostridiales_38_85 species=Clostridium saccharolyticum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
hypothetical protein
Tax=GWF2_Clostridiales_38_85_curated
L1_008_000M1_scaffold_1906_10
Clostridium sulfidigenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12641..13405)
DNA (765bp) protein (255aa)
Uncharacterized protein {ECO:0000313|EMBL:KEZ86816.1}; TaxID=318464 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sulfidigenes.;"
RNA polymerase, sigma 28 subunit, FliA/WhiG subfamily id=2593108 bin=GWF2_Clostridiales_38_85 species=Clostridium saccharolyticum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
FliA/WhiG subfamily RNA polymerase sigma-28 subunit
L1_008_000M1_scaffold_1906_11
Ruminiclostridium thermocellum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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13595..13981
DNA (387bp) protein (129aa)
Helix-turn-helix domain protein n=2 Tax=Clostridium thermocellum RepID=H8EGX5_CLOTM
helix-turn-helix domain-containing protein
Helix-turn-helix domain protein {ECO:0000313|EMBL:ABN51602.1}; TaxID=203119 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium thermocellum (strain ATCC 27405 / DSM 1237 / NBRC 103400 /; NCIMB 10682 / NRRL B-4536 / VPI 7372) (Ruminiclostridium; thermocellum).;"
L1_008_000M1_scaffold_1906_12
[Clostridium] methylpentosum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(14152..15951)
DNA (1800bp) protein (600aa)
5'-nucleotidase, C-terminal domain protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EAS0_9CLOT
5'-nucleotidase, C-terminal domain protein {ECO:0000313|EMBL:EEG31388.1}; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] methylpentosum DSM 5476.;"
hypothetical protein
L1_008_000M1_scaffold_1906_13
Faecalitalea cylindroides, Faecalitalea, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(16248..17459)
DNA (1212bp) protein (404aa)
Site-specific recombinase XerD n=1 Tax=[Eubacterium] cylindroides T2-87 RepID=D4JDI5_9FIRM
Site-specific recombinase XerD
Site-specific recombinase XerD {ECO:0000313|EMBL:CBK88257.1}; TaxID=717960 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Faecalitalea.;" source="Faecalitalea cylindroides T2-87.;"
L1_008_000M1_scaffold_1906_14
Faecalitalea cylindroides, Faecalitalea, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(17603..18130)
DNA (528bp) protein (176aa)
Site-specific recombinase XerD n=1 Tax=[Eubacterium] cylindroides T2-87 RepID=D4JDI6_9FIRM
Site-specific recombinase XerD
Site-specific recombinase XerD {ECO:0000313|EMBL:CBK88258.1}; TaxID=717960 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Faecalitalea.;" source="Faecalitalea cylindroides T2-87.;"
Displaying 14 items

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