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L1_008_000M1_scaffold_1906_11

Organism: dasL1_008_000M1_concoct_10_sub_fa

near complete RP 46 / 55 MC: 8 BSCG 50 / 51 MC: 7 ASCG 14 / 38 MC: 3
Location: 13595..13981

Top 3 Functional Annotations

Value Algorithm Source
Helix-turn-helix domain protein n=2 Tax=Clostridium thermocellum RepID=H8EGX5_CLOTM similarity UNIREF
DB: UNIREF100
  • Identity: 52.9
  • Coverage: 51.0
  • Bit_score: 60
  • Evalue 1.30e-06
helix-turn-helix domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 52.9
  • Coverage: 51.0
  • Bit_score: 60
  • Evalue 3.70e-07
Helix-turn-helix domain protein {ECO:0000313|EMBL:ABN51602.1}; TaxID=203119 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium thermocellum (strain ATCC 27405 / DSM 1237 / NBRC 103400 /; NCIMB 10682 / NRRL B-4536 / VPI 7372) (Ruminiclostridium; thermocellum).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 52.9
  • Coverage: 51.0
  • Bit_score: 60
  • Evalue 1.90e-06

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Taxonomy

Ruminiclostridium thermocellum → Ruminiclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 387
ATGTTACAAATCCGCAAATTTTTTTCAATTTTAAGAAAAGTGAGCAAAAAGAGGCCGCTGCAAAACAGCCTTACAAAAAATGATACACAAAAATCGGTCCCCGAAAAAAGCAGAAACGCTTCTCTCGAGGGCCGATTTTCCCTGCCTGTTTTGAATTTCTTGTGCGGACTGCTCTTGCGGTTTTACTCTGCAGATGTTCCCCCATGTGTCCATTTTCCGCAGCGCGAGGCTGCCATCTACTGCGACATCACGGAGAAGGCATACCAAAACTACGAGCTGATGACGCGGGAACCAAAGCTGGAGATTCTGGTCCGCATCGCGGATCTCTTTGAGGTTTCGCTCGACTATCTCACCGGGCGAACGGATTGCAGACCGGTAAAACATTGA
PROTEIN sequence
Length: 129
MLQIRKFFSILRKVSKKRPLQNSLTKNDTQKSVPEKSRNASLEGRFSLPVLNFLCGLLLRFYSADVPPCVHFPQREAAIYCDITEKAYQNYELMTREPKLEILVRIADLFEVSLDYLTGRTDCRPVKH*