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L1_008_000M1_scaffold_2555

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_2555_1
Clostridium sp. SY8519, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(114..902)
DNA (789bp) protein (263aa)
mRNA interferase {ECO:0000256|PIRNR:PIRNR033490}; EC=3.1.-.- {ECO:0000256|PIRNR:PIRNR033490};; TaxID=1042156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. (strain SY8519).;"
hypothetical protein n=1 Tax=Dehalobacter sp. FTH1 RepID=UPI0003704CC6
hypothetical protein
L1_008_000M1_scaffold_2555_2
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

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1534..1959
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6D1D1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA81545.1}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
hypothetical protein
L1_008_000M1_scaffold_2555_3
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

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comp(2430..3191)
DNA (762bp) protein (254aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6LLQ1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB86820.1}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
hypothetical protein
L1_008_000M1_scaffold_2555_4
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3191..3724)
DNA (534bp) protein (178aa)
Tungsten formylmethanofuran dehydrogenase, subunit E, FwdE n=2 Tax=Clostridiales RepID=G9YS42_9FIRM
Tungsten formylmethanofuran dehydrogenase, subunit E, FwdE {ECO:0000313|EMBL:EHM46646.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
hypothetical protein
L1_008_000M1_scaffold_2555_5
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

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comp(3736..4545)
DNA (810bp) protein (270aa)
Putative oligopeptide ABC transporter permease protein n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6LXD4_9FIRM
Putative oligopeptide ABC transporter permease protein {ECO:0000313|EMBL:CDB86821.1}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
Oligopeptide transport system permease protein OppC
L1_008_000M1_scaffold_2555_6
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

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comp(4542..5522)
DNA (981bp) protein (327aa)
Peptide/opine/nickel uptake ABC transporter PepT family permease protein n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6MLY7_9FIRM
Peptide/opine/nickel uptake ABC transporter PepT family permease protein {ECO:0000313|EMBL:CDB86822.1}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
Binding-protein-dependent transport systems inner membrane component
L1_008_000M1_scaffold_2555_7
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

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comp(5548..7239)
DNA (1692bp) protein (564aa)
Peptide ABC transporter solute-binding protein n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6LLQ6_9FIRM
Peptide ABC transporter solute-binding protein {ECO:0000313|EMBL:CDB86825.1}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
peptide ABC transporter substrate-binding protein
L1_008_000M1_scaffold_2555_8
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

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comp(7236..7928)
DNA (693bp) protein (231aa)
Dipeptide ABC transporter ATP-binding protein DppF n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6LH51_9FIRM
Dipeptide ABC transporter ATP-binding protein DppF {ECO:0000313|EMBL:CDB86823.1}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
ABC transporter ATPase
L1_008_000M1_scaffold_2555_9
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

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comp(7907..8818)
DNA (912bp) protein (304aa)
Oligopeptide/dipeptide ABC transporter ATP-binding C-terminal domain protein n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6LT25_9FIRM
Oligopeptide/dipeptide ABC transporter ATP-binding C-terminal domain protein {ECO:0000313|EMBL:CDB86824.1}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
peptide ABC transporter ATP-binding protein
L1_008_000M1_scaffold_2555_10
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

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9136..9834
DNA (699bp) protein (233aa)
Predicted membrane protein n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5RZM7_9FIRM
Predicted membrane protein {ECO:0000313|EMBL:CCZ46690.1}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
Predicted membrane protein
L1_008_000M1_scaffold_2555_11
BJP_IG2157_Clostridiales_52_13, Dethiosulfatibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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9831..11870
DNA (2040bp) protein (680aa)
Collagenase and related proteases (EC:3.4.-.-)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5B5H7_9CLOT
Tax=BJP_IG2157_Clostridiales_52_13
L1_008_000M1_scaffold_2555_12
unknown

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11897..12205
DNA (309bp) protein (103aa)

This feature has no annotations

L1_008_000M1_scaffold_2555_13
Firmicutes bacterium CAG:534, Firmicutes, Bacteria

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12423..13079
DNA (657bp) protein (219aa)
Acetyltransferase GNAT family n=1 Tax=Firmicutes bacterium CAG:534 RepID=R7A0B7_9FIRM
Acetyltransferase GNAT family {ECO:0000313|EMBL:CDD46741.1}; TaxID=1263027 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:534.;"
GNAT family acetyltransferase
L1_008_000M1_scaffold_2555_14
Firmicutes bacterium CAG:110, Firmicutes, Bacteria

Not on your lists

13182..13595
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:110 RepID=R5ERV3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX91342.1}; TaxID=1263000 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:110.;"
hypothetical protein
L1_008_000M1_scaffold_2555_15
Firmicutes bacterium CAG:110, Firmicutes, Bacteria

Not on your lists

13597..13797
DNA (201bp) protein (67aa)
Predicted transcriptional regulators n=1 Tax=Firmicutes bacterium CAG:110 RepID=R5EF83_9FIRM
Predicted transcriptional regulators {ECO:0000313|EMBL:CCX91340.1}; TaxID=1263000 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:110.;"
Predicted transcriptional regulators
L1_008_000M1_scaffold_2555_16
Enterococcus faecium, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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14249..15448
DNA (1200bp) protein (400aa)
Uncharacterized protein n=30 Tax=Bacteria RepID=H8LCF1_ENTFU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCJ27742.1}; TaxID=1352 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecium (Streptococcus faecium).;"
L1_008_000M1_scaffold_2555_17
Enterococcus faecium, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

15543..16019
DNA (477bp) protein (159aa)
Uncharacterized protein n=8 Tax=Bacteria RepID=H8LCE9_ENTFU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFC64879.1}; TaxID=1155766 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecium (strain Aus0004).;"
L1_008_000M1_scaffold_2555_18
Enterococcus faecium, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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16016..16321
DNA (306bp) protein (102aa)
TraG/TraD family protein n=24 Tax=Bacteria RepID=H8LCE8_ENTFU
TraG/TraD family protein
Putative conjugal transfer protein, TraG/TraD family {ECO:0000313|EMBL:CCJ27745.1}; TaxID=1352 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecium (Streptococcus faecium).;"
Displaying 18 items

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