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L1_008_000M1_scaffold_317

Search features with annotation key words

Displaying items 1-30 of 86 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_317_1
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(553..1260)
DNA (708bp) protein (236aa)
Ribosomal RNA small subunit methyltransferase G {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00095882}; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00277524};; 16S rRNA 7-methylguanosine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00074}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
16S rRNA m(7)G-527 methyltransferase (EC:2.1.1.- 2.1.-.-)
16S rRNA methyltransferase n=1 Tax=Clostridium sporosphaeroides RepID=UPI00036C390E
L1_008_000M1_scaffold_317_2
Firmicutes bacterium CAG:94, Firmicutes, Bacteria

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comp(1257..3149)
DNA (1893bp) protein (631aa)
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG n=1 Tax=Firmicutes bacterium CAG:94 RepID=R6ZDG5_9FIRM
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG {ECO:0000256|HAMAP-Rule:MF_00129}; Glucose-inhibited division protein A {ECO:0000256|HAMAP-Rule:MF_00129}; TaxID=1262989 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:94.;"
glucose-inhibited division protein A
L1_008_000M1_scaffold_317_3
unknown

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3196..3453
DNA (258bp) protein (86aa)

This feature has no annotations

L1_008_000M1_scaffold_317_4
unknown

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3474..3635
DNA (162bp) protein (54aa)

This feature has no annotations

L1_008_000M1_scaffold_317_5
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4062..5429)
DNA (1368bp) protein (456aa)
tRNA modification GTPase MnmE {ECO:0000256|HAMAP-Rule:MF_00379}; EC=3.6.-.- {ECO:0000256|HAMAP-Rule:MF_00379};; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
tRNA modification GTPase MnmE n=1 Tax=Clostridium sp. MSTE9 RepID=J1H219_9CLOT
tRNA modification GTPase TrmE
L1_008_000M1_scaffold_317_6
unknown

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comp(5545..7212)
DNA (1668bp) protein (556aa)

This feature has no annotations

L1_008_000M1_scaffold_317_7
unknown

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comp(7225..8067)
DNA (843bp) protein (281aa)

This feature has no annotations

L1_008_000M1_scaffold_317_8
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8229..9074)
DNA (846bp) protein (282aa)
R3H domain protein n=1 Tax=Clostridium sp. MSTE9 RepID=J0MXY3_9CLOT
R3H domain protein {ECO:0000313|EMBL:EJF39249.1}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
single-stranded nucleic acid binding R3H domain-containing protein
L1_008_000M1_scaffold_317_9
Clostridium sp. CAG:1013, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9181..10287)
DNA (1107bp) protein (369aa)
60Kd inner membrane protein n=1 Tax=Clostridium sp. CAG:1013 RepID=R5AB18_9CLOT
60Kd inner membrane protein {ECO:0000313|EMBL:CCX39029.1}; TaxID=1262769 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1013.;"
membrane protein insertase, YidC/Oxa1 family, C-terminal domain
L1_008_000M1_scaffold_317_10
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10303..10542)
DNA (240bp) protein (80aa)
Putative membrane protein insertion efficiency factor n=2 Tax=Clostridium RepID=A7VRT2_9CLOT
Putative membrane protein insertion efficiency factor {ECO:0000256|HAMAP-Rule:MF_00386, ECO:0000256|SAAS:SAAS00100919}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
conserved hypothetical protein TIGR00278
L1_008_000M1_scaffold_317_11
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10539..10877)
DNA (339bp) protein (113aa)
Ribonuclease P protein component {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143752}; Short=RNase P protein {ECO:0000256|HAMAP-Rule:MF_00227};; Short=RNaseP protein {ECO:0000256|HAMAP-Rule:MF_00227};; EC=3.1.26.5 {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143815};; Protein C5 {ECO:0000256|HAMAP-Rule:MF_00227}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
ribonuclease P protein component, eubacterial (EC:3.1.26.5)
Ribonuclease P protein component n=2 Tax=Clostridium RepID=A7VRT1_9CLOT
L1_008_000M1_scaffold_317_12
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10978..11112)
DNA (135bp) protein (45aa)
50S ribosomal protein L34 n=1 Tax=Clostridium sp. CAG:352 RepID=R6RT37_9CLOT
50S ribosomal protein L34 {ECO:0000256|HAMAP-Rule:MF_00391}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
LSU ribosomal protein L34P
L1_008_000M1_scaffold_317_13
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11489..12796
DNA (1308bp) protein (436aa)
Chromosomal replication initiator protein DnaA n=1 Tax=Clostridium sp. MSTE9 RepID=J0N4B0_9CLOT
Chromosomal replication initiator protein DnaA {ECO:0000256|HAMAP-Rule:MF_00377, ECO:0000256|SAAS:SAAS00009621}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
chromosomal replication initiator protein DnaA
L1_008_000M1_scaffold_317_14
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13335..14441
DNA (1107bp) protein (369aa)
DNA polymerase III subunit beta {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018186}; EC=2.7.7.7 {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018259};; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
DNA polymerase III subunit beta (EC:2.7.7.7)
DNA polymerase III subunit beta n=1 Tax=Clostridium sp. MSTE9 RepID=J1H255_9CLOT
L1_008_000M1_scaffold_317_15
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15185..15475
DNA (291bp) protein (97aa)
S4 domain protein n=1 Tax=Clostridium sp. MSTE9 RepID=J1H1I2_9CLOT
S4 domain protein {ECO:0000313|EMBL:EJF39300.1}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
hypothetical protein
L1_008_000M1_scaffold_317_16
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15462..16547
DNA (1086bp) protein (362aa)
DNA replication and repair protein RecF n=1 Tax=Clostridium leptum DSM 753 RepID=A7VRS2_9CLOT
DNA replication and repair protein RecF {ECO:0000256|HAMAP-Rule:MF_00365, ECO:0000256|RuleBase:RU000578}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
DNA replication and repair protein RecF
L1_008_000M1_scaffold_317_17
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16566..16838
DNA (273bp) protein (91aa)
hypothetical protein n=1 Tax=Clostridium sporosphaeroides RepID=UPI0003679807
Uncharacterized protein {ECO:0000313|EMBL:EJF39291.1}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
hypothetical protein
L1_008_000M1_scaffold_317_18
Eubacterium sp. CAG:581, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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16855..17541
DNA (687bp) protein (229aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:581 RepID=R7NK00_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDF12986.1}; TaxID=1262890 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:581.;"
L1_008_000M1_scaffold_317_19
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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17601..19541
DNA (1941bp) protein (647aa)
DNA gyrase subunit B {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363};; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
gyrB; DNA gyrase subunit B (EC:5.99.1.3)
DNA gyrase subunit B n=1 Tax=Clostridium sporosphaeroides RepID=UPI00037E118C
L1_008_000M1_scaffold_317_20
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19646..20344
DNA (699bp) protein (233aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=A7VRR8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC05167.1}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
L1_008_000M1_scaffold_317_21
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20376..20963
DNA (588bp) protein (196aa)
hypothetical protein n=1 Tax=Clostridium sporosphaeroides RepID=UPI00035F0725
Uncharacterized protein {ECO:0000313|EMBL:EJF39253.1}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
L1_008_000M1_scaffold_317_22
unknown

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20956..21552
DNA (597bp) protein (199aa)

This feature has no annotations

L1_008_000M1_scaffold_317_23
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


21545..24106
DNA (2562bp) protein (854aa)
DNA gyrase subunit A {ECO:0000256|HAMAP-Rule:MF_01897}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01897};; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
DNA gyrase subunit A (EC:5.99.1.3)
DNA gyrase subunit A n=1 Tax=Clostridium sp. MSTE9 RepID=J0WSD1_9CLOT
L1_008_000M1_scaffold_317_24
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24148..24840
DNA (693bp) protein (231aa)
PF07007 family protein n=1 Tax=Clostridium sp. MSTE9 RepID=J0N4D0_9CLOT
PF07007 family protein {ECO:0000313|EMBL:EJF39282.1}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
L1_008_000M1_scaffold_317_25
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25013..25558
DNA (546bp) protein (182aa)
ADP-ribose pyrophosphatase (EC:3.6.1.13)
Hydrolase, NUDIX family n=2 Tax=Clostridium RepID=A7VT69_9CLOT
Hydrolase, NUDIX family {ECO:0000313|EMBL:EDO61365.1}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
L1_008_000M1_scaffold_317_26
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25756..26238
DNA (483bp) protein (161aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=G9YXR7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO27389.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L1_008_000M1_scaffold_317_27
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26508..27140)
DNA (633bp) protein (211aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N3V0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY98665.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
hypothetical protein
L1_008_000M1_scaffold_317_28
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(27142..28938)
DNA (1797bp) protein (599aa)
Aspartate--tRNA ligase {ECO:0000313|EMBL:EJF41763.1}; EC=6.1.1.- {ECO:0000313|EMBL:EJF41763.1};; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
aspS1; Aspartate-tRNA ligase (EC:6.1.1.12)
Aspartate--tRNA ligase n=1 Tax=Clostridium sp. MSTE9 RepID=J1H8X4_9CLOT
L1_008_000M1_scaffold_317_29
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(29195..30487)
DNA (1293bp) protein (431aa)
Histidine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629}; EC=6.1.1.21 {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629};; Histidyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00127}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
histidyl-tRNA synthetase (EC:6.1.1.21)
Histidine--tRNA ligase n=1 Tax=Clostridium sp. CAG:352 RepID=R6S2L1_9CLOT
L1_008_000M1_scaffold_317_30
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30921..31325)
DNA (405bp) protein (135aa)
Methylglyoxal synthase {ECO:0000256|HAMAP-Rule:MF_00549, ECO:0000256|SAAS:SAAS00089917}; Short=MGS {ECO:0000256|HAMAP-Rule:MF_00549};; EC=4.2.3.3 {ECO:0000256|HAMAP-Rule:MF_00549, ECO:0000256|SAAS:SAAS00089921};; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
mgsA; Methylglyoxal synthase (EC:4.2.3.3)
Methylglyoxal synthase n=2 Tax=Clostridium RepID=A7VRP5_9CLOT
Displaying items 1-30 of 86 in total

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