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L1_008_000M1_scaffold_481

Search features with annotation key words

Displaying items 1-30 of 57 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_481_1
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1..1440
DNA (1440bp) protein (480aa)
heat shock protein 90 n=1 Tax=Clostridium sporosphaeroides RepID=UPI00036CA87B
Chaperone protein HtpG {ECO:0000256|HAMAP-Rule:MF_00505, ECO:0000256|SAAS:SAAS00218406}; Heat shock protein HtpG {ECO:0000256|HAMAP-Rule:MF_00505}; High temperature protein G {ECO:0000256|HAMAP-Rule:MF_00505}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
Molecular chaperone, HSP90 family
L1_008_000M1_scaffold_481_2
Firmicutes bacterium CAG:94, Firmicutes, Bacteria

Not on your lists

comp(1659..2297)
DNA (639bp) protein (213aa)
Cytidylate kinase n=1 Tax=Firmicutes bacterium CAG:94 RepID=R6YKY4_9FIRM
Cytidylate kinase {ECO:0000313|EMBL:CDD29246.1}; TaxID=1262989 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:94.;"
cytidylate kinase
L1_008_000M1_scaffold_481_3
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2486..2923)
DNA (438bp) protein (146aa)
Divergent PAP2 family n=2 Tax=Clostridium RepID=A7VR90_9CLOT
Divergent PAP2 family {ECO:0000313|EMBL:EDO62212.1}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
hypothetical protein
L1_008_000M1_scaffold_481_4
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2910..3689)
DNA (780bp) protein (260aa)
SNARE-like domain protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VR91_9CLOT
SNARE-like domain protein {ECO:0000313|EMBL:EDO62214.1}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
membrane protein
L1_008_000M1_scaffold_481_5
Paenibacillus sp. MAEPY2, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(3825..5051)
DNA (1227bp) protein (409aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1395587 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. MAEPY2.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=9 Tax=Clostridium difficile RepID=G6B450_CLODI
Two-component sensor histidine kinase
L1_008_000M1_scaffold_481_6
Paenibacillus macerans, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(5039..5713)
DNA (675bp) protein (225aa)
transcriptional regulator n=1 Tax=Paenibacillus elgii RepID=UPI000248D873
Uncharacterized protein {ECO:0000313|EMBL:KFN10612.1}; TaxID=44252 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus macerans (Bacillus macerans).;"
spaR; Transcriptional regulatory protein SpaR
L1_008_000M1_scaffold_481_7
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5966..7375
DNA (1410bp) protein (470aa)
MATE efflux family protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VUV6_9CLOT
MATE efflux family protein {ECO:0000313|EMBL:EDO60756.1}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
MATE efflux family protein
L1_008_000M1_scaffold_481_8
[Clostridium] methylpentosum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7567..9411)
DNA (1845bp) protein (615aa)
Asparagine synthase (Glutamine-hydrolyzing) {ECO:0000313|EMBL:EEG31093.1}; EC=6.3.5.4 {ECO:0000313|EMBL:EEG31093.1};; Flags: Fragment;; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] methylpentosum DSM 5476.;"
Asparagine synthetase (Fragment) n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EC32_9CLOT
asparagine synthase
L1_008_000M1_scaffold_481_9
[Clostridium] methylpentosum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9457..10182)
DNA (726bp) protein (242aa)
Aspartate racemase {ECO:0000313|EMBL:EEG30923.1}; EC=5.1.1.13 {ECO:0000313|EMBL:EEG30923.1};; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] methylpentosum DSM 5476.;"
aspartate racemase (EC:5.1.1.13)
Aspartate racemase n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EC33_9CLOT
L1_008_000M1_scaffold_481_10
Firmicutes bacterium CAG:94, Firmicutes, Bacteria

Not on your lists

comp(10204..11544)
DNA (1341bp) protein (447aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:94 RepID=R6XU91_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD27303.1}; TaxID=1262989 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:94.;"
hypothetical protein
L1_008_000M1_scaffold_481_11
unknown

Not on your lists

comp(12112..12369)
DNA (258bp) protein (86aa)

This feature has no annotations

L1_008_000M1_scaffold_481_12
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12371..13582)
DNA (1212bp) protein (404aa)
Threonine ammonia-lyase {ECO:0000313|EMBL:EJF38543.1}; EC=4.3.1.19 {ECO:0000313|EMBL:EJF38543.1};; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
Threonine ammonia-lyase n=1 Tax=Clostridium sp. MSTE9 RepID=J1H001_9CLOT
L-threonine ammonia-lyase
L1_008_000M1_scaffold_481_13
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13628..14131)
DNA (504bp) protein (168aa)
Acetolactate synthase, small subunit {ECO:0000313|EMBL:EJF38577.1}; EC=2.2.1.6 {ECO:0000313|EMBL:EJF38577.1};; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
Acetolactate synthase, small subunit n=1 Tax=Clostridium sp. MSTE9 RepID=J0N2H4_9CLOT
acetolactate synthase small subunit
L1_008_000M1_scaffold_481_14
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14161..15837)
DNA (1677bp) protein (559aa)
Acetolactate synthase {ECO:0000256|RuleBase:RU003591}; EC=2.2.1.6 {ECO:0000256|RuleBase:RU003591};; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
acetolactate synthase, large subunit (EC:2.2.1.6)
Acetolactate synthase, large subunit, biosynthetic type n=1 Tax=Clostridium sp. MSTE9 RepID=J0N2G4_9CLOT
L1_008_000M1_scaffold_481_15
unknown

Not on your lists

16312..16431
DNA (120bp) protein (40aa)

This feature has no annotations

L1_008_000M1_scaffold_481_16
Treponema azotonutricium, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

16692..17777
DNA (1086bp) protein (362aa)
Putative uncharacterized protein n=1 Tax=Treponema azotonutricium (strain ATCC BAA-888 / DSM 13862 / ZAS-9) RepID=F5YA33_TREAZ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEF80635.1}; TaxID=545695 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema azotonutricium (strain ATCC BAA-888 / DSM 13862 / ZAS-9).;"
L1_008_000M1_scaffold_481_17
[Clostridium] cellulosi, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17868..18584)
DNA (717bp) protein (239aa)
Zinc-binding CMP/dCMP deaminase n=1 Tax=Clostridium pasteurianum DSM 525 RepID=L7EIY4_CLOPA
cytidine/deoxycytidylate deaminase family protein
Uncharacterized protein {ECO:0000313|EMBL:CDZ23457.1}; TaxID=29343 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] cellulosi.;"
L1_008_000M1_scaffold_481_18
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


18809..19678
DNA (870bp) protein (290aa)
Ribosomal RNA small subunit methyltransferase A {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015019}; EC=2.1.1.182 {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015085};; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethyladenosine transferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethylase {ECO:0000256|HAMAP-Rule:MF_00607}; S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
dimethyladenosine transferase (EC:2.1.1.-)
dimethyladenosine transferase n=1 Tax=Clostridium sporosphaeroides RepID=UPI000382CC54
L1_008_000M1_scaffold_481_19
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19675..19884
DNA (210bp) protein (70aa)
Uncharacterized protein n=1 Tax=Clostridium sp. MSTE9 RepID=J0MXW8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EJF39234.1}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
L1_008_000M1_scaffold_481_20
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19881..20621
DNA (741bp) protein (247aa)
Uncharacterized protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QDU1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EKY25825.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
hypothetical protein
L1_008_000M1_scaffold_481_21
Clostridium sp. CAG:169, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21091..21963
DNA (873bp) protein (291aa)
S-adenosylmethionine decarboxylase proenzyme {ECO:0000256|HAMAP-Rule:MF_00465, ECO:0000256|SAAS:SAAS00039304}; Short=AdoMetDC {ECO:0000256|HAMAP-Rule:MF_00465};; Short=SAMDC {ECO:0000256|HAMAP-Rule:MF_00465};; EC=4.1.1.50 {ECO:0000256|HAMAP-Rule:MF_00465, ECO:0000256|SAAS:SAAS00093036};; TaxID=1262778 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:169.;"
S-adenosylmethionine decarboxylase proenzyme, Escherichia coli form (EC:4.1.1.50)
S-adenosylmethionine decarboxylase proenzyme n=1 Tax=Clostridium sp. CAG:169 RepID=R6BD63_9CLOT
L1_008_000M1_scaffold_481_22
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21988..23442
DNA (1455bp) protein (485aa)
arginine decarboxylase (EC:4.1.1.18 4.1.1.19)
Uncharacterized protein n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W661_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOQ40021.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
L1_008_000M1_scaffold_481_23
Clostridium sp. CAG:43, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23446..24306
DNA (861bp) protein (287aa)
spermidine synthase (EC:2.5.1.16)
Spermidine synthase n=1 Tax=Clostridium sp. CAG:43 RepID=R7B445_9CLOT
Polyamine aminopropyltransferase {ECO:0000256|HAMAP-Rule:MF_00198}; Putrescine aminopropyltransferase {ECO:0000256|HAMAP-Rule:MF_00198}; Spermidine synthase {ECO:0000256|HAMAP-Rule:MF_00198}; TaxID=1262805 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:43.;"
L1_008_000M1_scaffold_481_24
Firmicutes bacterium CAG:94, Firmicutes, Bacteria

Not on your lists

24287..25138
DNA (852bp) protein (284aa)
agmatinase (EC:3.5.3.11)
Agmatinase n=1 Tax=Firmicutes bacterium CAG:94 RepID=R6YCX7_9FIRM
Agmatinase {ECO:0000313|EMBL:CDD29114.1}; TaxID=1262989 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:94.;"
L1_008_000M1_scaffold_481_25
Firmicutes bacterium CAG:94, Firmicutes, Bacteria

Not on your lists

25319..26578
DNA (1260bp) protein (420aa)
Saccharopine dehydrogenase n=1 Tax=Firmicutes bacterium CAG:94 RepID=R6XZE2_9FIRM
Saccharopine dehydrogenase {ECO:0000313|EMBL:CDD29113.1}; TaxID=1262989 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:94.;"
saccharopine dehydrogenase
L1_008_000M1_scaffold_481_26
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26578..27711
DNA (1134bp) protein (378aa)
carboxynorspermidine decarboxylase (EC:4.1.1.-)
Carboxynorspermidine decarboxylase n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W536_9CLOT
Carboxynorspermidine decarboxylase {ECO:0000313|EMBL:EOQ40025.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
L1_008_000M1_scaffold_481_27
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(28056..28457)
DNA (402bp) protein (134aa)
Uncharacterized protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6P309_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM97310.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
hypothetical protein
L1_008_000M1_scaffold_481_28
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28448..28837)
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6P308_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM97309.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
hypothetical protein
L1_008_000M1_scaffold_481_29
Clostridium sp. CAG:1013, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28857..29369)
DNA (513bp) protein (171aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:1013 RepID=R5A4H4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX37798.1}; TaxID=1262769 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1013.;"
Bacterial transcription activator, effector binding domain.
L1_008_000M1_scaffold_481_30
unknown

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29943..30089
DNA (147bp) protein (49aa)

This feature has no annotations

Displaying items 1-30 of 57 in total

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