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L1_008_000M1_scaffold_831

Search features with annotation key words

Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_831_1
[Clostridium] papyrosolvens, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..492)
DNA (492bp) protein (164aa)
Alpha-galactosidase n=1 Tax=Clostridium papyrosolvens C7 RepID=U4R6Y8_9CLOT
Alpha-galactosidase {ECO:0000313|EMBL:EPR13799.1}; TaxID=1330534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] papyrosolvens C7.;"
family 4 glycosyl hydrolase, alpha-galactosidase/6-phospho-beta-glucosidase
L1_008_000M1_scaffold_831_2
[Clostridium] cellulolyticum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

770..1585
DNA (816bp) protein (272aa)
Transcriptional regulator, AraC family n=1 Tax=Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 / H10) RepID=B8I1T1_CLOCE
AraC family transcriptional regulator
Transcriptional regulator, AraC family {ECO:0000313|EMBL:ACL77716.1}; TaxID=394503 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 /; H10).;"
L1_008_000M1_scaffold_831_3
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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1592..2452
DNA (861bp) protein (287aa)
Uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PCE1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS10896.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
Uncharacterized conserved protein related to MYG1 family
L1_008_000M1_scaffold_831_4
unknown

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2467..3369
DNA (903bp) protein (301aa)

This feature has no annotations

L1_008_000M1_scaffold_831_5
Clostridium sp. BNL1100, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3637..4050)
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Clostridium sp. BNL1100 RepID=H2J9C3_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEY67940.1}; Flags: Precursor;; TaxID=755731 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. BNL1100.;"
L1_008_000M1_scaffold_831_6
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4043..4501)
DNA (459bp) protein (153aa)
Transcriptional regulator, MarR family n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D6E8_9CLOT
Transcriptional regulator, MarR family {ECO:0000313|EMBL:EEG53090.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
regulatory protein MarR
L1_008_000M1_scaffold_831_7
Alkaliphilus oremlandii, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

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4710..6554
DNA (1845bp) protein (615aa)
ATP-dependent metalloprotease FtsH (EC:3.6.4.3)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; TaxID=350688 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus oremlandii (strain OhILAs) (Clostridium oremlandii; (strain OhILAs)).;"
ATP-dependent zinc metalloprotease FtsH n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=A8MJ61_ALKOO
L1_008_000M1_scaffold_831_8
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6660..7499)
DNA (840bp) protein (280aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GX34_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB25836.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
hypothetical protein
L1_008_000M1_scaffold_831_9
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7493..8191)
DNA (699bp) protein (233aa)
ABC transporter n=1 Tax=Clostridium sporosphaeroides RepID=UPI000368B741
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EJF40079.1}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
ABC transporter
L1_008_000M1_scaffold_831_10
BJP_IG2157_Clostridiales_35_16, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8179..8556)
DNA (378bp) protein (126aa)
Transcriptional regulator, GntR family n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PBA2_9FIRM
putative GntR family transcriptional regulator
Tax=BJP_IG2157_Clostridiales_35_16
L1_008_000M1_scaffold_831_11
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8811..9338)
DNA (528bp) protein (176aa)
spore maturation protein n=1 Tax=Clostridium sporosphaeroides RepID=UPI00036432D1
Transporter gate domain protein {ECO:0000313|EMBL:EDO62814.1}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
Uncharacterized membrane protein
L1_008_000M1_scaffold_831_12
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9331..9906)
DNA (576bp) protein (192aa)
Putative spore maturation protein A n=1 Tax=Clostridium sp. MSTE9 RepID=J1H022_9CLOT
Putative spore maturation protein A {ECO:0000313|EMBL:EJF38563.1}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
nucleoside recognition domain-containing protein
L1_008_000M1_scaffold_831_13
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10083..10358
DNA (276bp) protein (92aa)
AbrB family transcriptional regulator n=1 Tax=Clostridium pasteurianum DSM 525 RepID=L7EID4_CLOPA
AbrB family transcriptional regulator
Sporulation-related transcriptional regulator AbrB {ECO:0000313|EMBL:AEJ38392.1}; TaxID=1051632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Sulfobacillus.;" source="Sulfobacillus acidophilus (strain TPY).;"
L1_008_000M1_scaffold_831_14
Firmicutes bacterium CAG:94, Firmicutes, Bacteria

Not on your lists

comp(10477..11853)
DNA (1377bp) protein (459aa)
ytjP; putative dipeptidase YtjP (EC:3.4.13.-)
Dipeptidase PepV n=1 Tax=Firmicutes bacterium CAG:94 RepID=R6Y874_9FIRM
Dipeptidase PepV {ECO:0000313|EMBL:CDD30120.1}; TaxID=1262989 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:94.;"
L1_008_000M1_scaffold_831_15
Coprococcus eutactus, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12312..13148)
DNA (837bp) protein (279aa)
Uncharacterized protein n=2 Tax=Coprococcus RepID=A8SY18_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDP25216.1}; TaxID=411474 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus eutactus ATCC 27759.;"
hypothetical protein
L1_008_000M1_scaffold_831_16
Clostridium sp. CAG:1013, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13246..14190)
DNA (945bp) protein (315aa)
Transketolase, C-terminal subunit (EC:2.2.1.1)
Transketolase C-terminal subunit n=1 Tax=Clostridium sp. CAG:1013 RepID=R5A815_9CLOT
Transketolase C-terminal subunit {ECO:0000313|EMBL:CCX38838.1}; TaxID=1262769 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1013.;"
L1_008_000M1_scaffold_831_17
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(14190..15035)
DNA (846bp) protein (282aa)
Transketolase, N-terminal subunit (EC:2.2.1.1)
Transketolase, thiamine diphosphate binding domain protein n=3 Tax=root RepID=A7VYD9_9CLOT
Transketolase thiamine diphosphate binding domain protein {ECO:0000313|EMBL:CDC03890.1}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
L1_008_000M1_scaffold_831_18
Clostridium sp. CAG:413, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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15274..16284
DNA (1011bp) protein (337aa)
2-dehydropantoate 2-reductase {ECO:0000256|RuleBase:RU003776}; EC=1.1.1.169 {ECO:0000256|RuleBase:RU003776};; TaxID=1262803 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:413.;"
2-dehydropantoate 2-reductase n=1 Tax=Clostridium sp. CAG:413 RepID=R6NWB0_9CLOT
2-dehydropantoate 2-reductase
L1_008_000M1_scaffold_831_19
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16481..17818)
DNA (1338bp) protein (446aa)
Permease family protein n=1 Tax=Clostridium sp. MSTE9 RepID=J0MWE5_9CLOT
Permease family protein {ECO:0000313|EMBL:EJF38629.1}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
uracil-xanthine permease
L1_008_000M1_scaffold_831_20
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17956..18612)
DNA (657bp) protein (219aa)
rubredoxin n=1 Tax=Clostridium sporosphaeroides RepID=UPI00036FC935
Rubredoxin {ECO:0000256|RuleBase:RU003820}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
FMN-binding flavin reductase-like protein
L1_008_000M1_scaffold_831_21
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18767..20032)
DNA (1266bp) protein (422aa)
ATPase AAA family n=1 Tax=Clostridium leptum CAG:27 RepID=R6MXL8_9CLOT
ATPase AAA family {ECO:0000313|EMBL:CDC03550.1}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
Recombination protein MgsA
L1_008_000M1_scaffold_831_22
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(20363..21613)
DNA (1251bp) protein (417aa)
Serine hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00051}; Short=SHMT {ECO:0000256|HAMAP-Rule:MF_00051};; Short=Serine methylase {ECO:0000256|HAMAP-Rule:MF_00051};; EC=2.1.2.1 {ECO:0000256|HAMAP-Rule:MF_00051};; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
serine hydroxymethyltransferase (EC:2.1.2.1)
Serine hydroxymethyltransferase n=1 Tax=Clostridium sp. MSTE9 RepID=J0WQG9_9CLOT
L1_008_000M1_scaffold_831_23
Eubacterium sp. CAG:202, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(21724..22989)
DNA (1266bp) protein (422aa)
Phosphoribosylamine--glycine ligase {ECO:0000256|HAMAP-Rule:MF_00138}; EC=6.3.4.13 {ECO:0000256|HAMAP-Rule:MF_00138};; GARS {ECO:0000256|HAMAP-Rule:MF_00138}; Glycinamide ribonucleotide synthetase {ECO:0000256|HAMAP-Rule:MF_00138}; Phosphoribosylglycinamide synthetase {ECO:0000256|HAMAP-Rule:MF_00138}; TaxID=1262884 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:202.;"
phosphoribosylamine--glycine ligase (EC:6.3.4.13)
Phosphoribosylamine--glycine ligase n=1 Tax=Eubacterium sp. CAG:202 RepID=R6MT92_9FIRM
L1_008_000M1_scaffold_831_24
[Clostridium] methylpentosum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23087..24265)
DNA (1179bp) protein (393aa)
AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) (EC:2.1.2.3)
AICARFT/IMPCHase bienzyme n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0E8X2_9CLOT
AICARFT/IMPCHase bienzyme {ECO:0000313|EMBL:EEG32116.1}; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] methylpentosum DSM 5476.;"
L1_008_000M1_scaffold_831_25
Clostridium sp. CAG:169, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24293..25000)
DNA (708bp) protein (236aa)
purO; IMP cyclohydrolase (EC:3.5.4.10)
IMP cyclohydrolase-like protein n=1 Tax=Clostridium sp. CAG:169 RepID=R6C8N5_9CLOT
IMP cyclohydrolase-like protein {ECO:0000313|EMBL:CDA61712.1}; TaxID=1262778 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:169.;"
L1_008_000M1_scaffold_831_26
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25005..25634)
DNA (630bp) protein (210aa)
Phosphoribosylglycinamide formyltransferase {ECO:0000256|HAMAP-Rule:MF_01930}; EC=2.1.2.2 {ECO:0000256|HAMAP-Rule:MF_01930};; 5'-phosphoribosylglycinamide transformylase {ECO:0000256|HAMAP-Rule:MF_01930}; GAR transformylase {ECO:0000256|HAMAP-Rule:MF_01930}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
Phosphoribosylglycinamide formyltransferase n=2 Tax=Clostridium RepID=A7VU33_9CLOT
phosphoribosylglycinamide formyltransferase
L1_008_000M1_scaffold_831_27
Firmicutes bacterium CAG:94, Firmicutes, Bacteria

Not on your lists

comp(25628..26668)
DNA (1041bp) protein (347aa)
Phosphoribosylformylglycinamidine cyclo-ligase {ECO:0000256|HAMAP-Rule:MF_00741, ECO:0000256|RuleBase:RU004370}; EC=6.3.3.1 {ECO:0000256|HAMAP-Rule:MF_00741, ECO:0000256|RuleBase:RU004370};; AIR synthase {ECO:0000256|HAMAP-Rule:MF_00741}; AIRS {ECO:0000256|HAMAP-Rule:MF_00741}; Phosphoribosyl-aminoimidazole synthetase {ECO:0000256|HAMAP-Rule:MF_00741}; TaxID=1262989 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:94.;"
phosphoribosylformylglycinamidine cyclo-ligase (EC:6.3.3.1)
Phosphoribosylformylglycinamidine cyclo-ligase n=1 Tax=Firmicutes bacterium CAG:94 RepID=R6ZCW3_9FIRM
L1_008_000M1_scaffold_831_28
Clostridium sp. CAG:1013, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(26845..27342)
DNA (498bp) protein (166aa)
N5-carboxyaminoimidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338}; Short=N5-CAIR mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};; EC=5.4.99.18 {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};; 5-(carboxyamino)imidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929}; TaxID=1262769 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1013.;"
phosphoribosylaminoimidazole carboxylase catalytic subunit (EC:4.1.1.21)
N5-carboxyaminoimidazole ribonucleotide mutase n=1 Tax=Clostridium sp. CAG:1013 RepID=R5A573_9CLOT
L1_008_000M1_scaffold_831_29
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27673..28581)
DNA (909bp) protein (303aa)
peptidase n=1 Tax=Clostridium sporosphaeroides RepID=UPI00037D8064
SPFH domain/Band 7 family protein {ECO:0000313|EMBL:EJF38938.1}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
Membrane protease subunits, stomatin/prohibitin homologs
L1_008_000M1_scaffold_831_30
Clostridium sp. CAG:413, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28730..29182)
DNA (453bp) protein (151aa)
Nodulation efficiency protein NfeD n=1 Tax=Clostridium sp. CAG:413 RepID=R6P2M4_9CLOT
Nodulation efficiency protein NfeD {ECO:0000313|EMBL:CDC12736.1}; TaxID=1262803 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:413.;"
hypothetical protein
Displaying items 1-30 of 36 in total

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