ggKbase home page

L1_008_000M1_scaffold_937

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_937_1
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

224..754
DNA (531bp) protein (177aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XBS7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ47805.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hypothetical protein
L1_008_000M1_scaffold_937_2
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

947..1684
DNA (738bp) protein (246aa)
phosphonate-transporting ATPase (EC:3.6.3.28)
macrolide ABC transporter ATP-binding protein n=1 Tax=Clostridium sporosphaeroides RepID=UPI00036D3894
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EJF40531.1}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
L1_008_000M1_scaffold_937_3
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1681..3648
DNA (1968bp) protein (656aa)
CARDB domain protein n=1 Tax=Clostridium sp. MSTE9 RepID=J1H5A1_9CLOT
CARDB domain protein {ECO:0000313|EMBL:EJF40433.1}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
cell adhesion-related domain-containing protein
L1_008_000M1_scaffold_937_4
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3645..4991
DNA (1347bp) protein (449aa)
hypothetical protein n=1 Tax=Clostridium sporosphaeroides RepID=UPI000379D4BC
MacB-like periplasmic core domain protein {ECO:0000313|EMBL:EJF40475.1}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
lipoprotein release ABC transporter permease
L1_008_000M1_scaffold_937_5
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5115..5282)
DNA (168bp) protein (56aa)
Toxin-antitoxin system, antitoxin component, Xre domain protein n=2 Tax=Clostridium RepID=J0WXB0_9CLOT
Toxin-antitoxin system, antitoxin component, Xre domain protein {ECO:0000313|EMBL:EJF40966.1}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
hypothetical protein
L1_008_000M1_scaffold_937_6
Firmicutes bacterium CAG:94, Firmicutes, Bacteria

Not on your lists

5694..7154
DNA (1461bp) protein (487aa)
Nicotinate phosphoribosyltransferase {ECO:0000256|RuleBase:RU003838, ECO:0000256|SAAS:SAAS00075163}; EC=6.3.4.21 {ECO:0000256|RuleBase:RU003838, ECO:0000256|SAAS:SAAS00075163};; TaxID=1262989 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:94.;"
Nicotinate phosphoribosyltransferase n=1 Tax=Firmicutes bacterium CAG:94 RepID=R6Y5I4_9FIRM
putative nicotinate phosphoribosyltransferase
L1_008_000M1_scaffold_937_7
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

Not on your lists

comp(7767..8684)
DNA (918bp) protein (306aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5H5D7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY23274.1}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
Beta-lactamase class C and other penicillin binding proteins
L1_008_000M1_scaffold_937_8
[Clostridium] papyrosolvens, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8698..9711)
DNA (1014bp) protein (338aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=F1TEU8_9CLOT
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:EGD47264.1}; TaxID=588581 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] papyrosolvens DSM 2782.;"
NAD-dependent epimerase/dehydratase
L1_008_000M1_scaffold_937_9
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9918..10445
DNA (528bp) protein (176aa)
hypothetical protein n=1 Tax=Clostridium sporosphaeroides RepID=UPI00035D0AAE
Putative lipoprotein {ECO:0000313|EMBL:EJF40354.1}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
hypothetical protein
L1_008_000M1_scaffold_937_10
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10802..12139
DNA (1338bp) protein (446aa)
Cof-like hydrolase n=2 Tax=Clostridiales RepID=G9YNM6_9FIRM
Cof-like hydrolase {ECO:0000313|EMBL:EHM53348.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
metal dependent phosphohydrolase
L1_008_000M1_scaffold_937_11
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12302..12667
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D462_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEG53873.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
hypothetical protein
L1_008_000M1_scaffold_937_12
Eubacterium limosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12664..13725
DNA (1062bp) protein (354aa)
Ankyrin repeat-containing protein n=1 Tax=Eubacterium limosum (strain KIST612) RepID=E3GEG9_EUBLK
ankyrin repeat-containing protein
Ankyrin repeat-containing protein {ECO:0000313|EMBL:ADO37955.1}; TaxID=903814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium limosum (strain KIST612).;"
L1_008_000M1_scaffold_937_13
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13730..14758
DNA (1029bp) protein (343aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RU15_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL69412.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
hypothetical protein
L1_008_000M1_scaffold_937_14
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14910..15101)
DNA (192bp) protein (64aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=A7VWC6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC04422.1}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
L1_008_000M1_scaffold_937_15
Clostridium carboxidivorans, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15130..15435)
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Clostridium carboxidivorans P7 RepID=C6Q0M1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EET84958.1}; TaxID=536227 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium carboxidivorans P7.;"
hypothetical protein
L1_008_000M1_scaffold_937_16
Solobacterium moorei, Solobacterium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(15447..16004)
DNA (558bp) protein (186aa)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI000315B09A
Acetyltransferase, GNAT family {ECO:0000313|EMBL:EFW23560.1}; TaxID=706433 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Solobacterium.;" source="Solobacterium moorei F0204.;"
N-acetyltransferase GCN5
L1_008_000M1_scaffold_937_17
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15973..16542)
DNA (570bp) protein (190aa)
Uncharacterized protein n=1 Tax=Marvinbryantia formatexigens DSM 14469 RepID=C6LCV6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EET61770.1}; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
hypothetical protein
L1_008_000M1_scaffold_937_18
Clostridium sp. CAG:242, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16763..18118
DNA (1356bp) protein (452aa)
MATE efflux family protein n=1 Tax=Clostridium sp. CAG:242 RepID=R6CTP5_9CLOT
MATE efflux family protein {ECO:0000313|EMBL:CDA76204.1}; TaxID=1262783 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:242.;"
MATE family multidrug resistance protein
L1_008_000M1_scaffold_937_19
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18283..19026)
DNA (744bp) protein (248aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XBF4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ47682.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hypothetical protein
L1_008_000M1_scaffold_937_20
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19334..21304)
DNA (1971bp) protein (657aa)
Peptidase propeptide and YPEB domain protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YRE3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF56578.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
hypothetical protein
L1_008_000M1_scaffold_937_21
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21301..21885)
DNA (585bp) protein (195aa)
Sigma-70 family RNA polymerase sigma factor n=4 Tax=Clostridium RepID=E7GPP0_CLOSY
Sigma-70 family RNA polymerase sigma factor {ECO:0000313|EMBL:EGA93150.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
RNA polymerase sigma factor, sigma-70 family
L1_008_000M1_scaffold_937_22
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22122..22871
DNA (750bp) protein (250aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XG14_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ45695.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
4Fe-4S ferredoxin, iron-sulfur binding protein
L1_008_000M1_scaffold_937_23
Ruminococcus sp. CAG:579, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23051..24223
DNA (1173bp) protein (391aa)
Malic enzyme (EC:1.1.1.38)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:579 RepID=R6D3E3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA72297.1}; TaxID=1262963 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:579.;"
L1_008_000M1_scaffold_937_24
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24316..25191
DNA (876bp) protein (292aa)
polysaccharide deacetylase n=1 Tax=Clostridium sporosphaeroides RepID=UPI0003647CCD
Polysaccharide deacetylase {ECO:0000313|EMBL:CDC04160.1}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
polysaccharide deacetylase
L1_008_000M1_scaffold_937_25
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25265..26002
DNA (738bp) protein (246aa)
N-acetylmuramoyl-L-alanine amidase {ECO:0000313|EMBL:EJF39977.1}; EC=3.5.1.28 {ECO:0000313|EMBL:EJF39977.1};; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
N-acetylmuramoyl-L-alanine amidase n=1 Tax=Clostridium sporosphaeroides RepID=UPI000365EF23
N-acetylmuramoyl-L-alanine amidase
L1_008_000M1_scaffold_937_26
Firmicutes bacterium CAG:94, Firmicutes, Bacteria

Not on your lists

comp(26031..28445)
DNA (2415bp) protein (805aa)
E1-E2 ATPase n=1 Tax=Firmicutes bacterium CAG:94 RepID=R6Y8Y1_9FIRM
E1-E2 ATPase {ECO:0000313|EMBL:CDD27749.1}; TaxID=1262989 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:94.;"
cation-transporting ATPase
L1_008_000M1_scaffold_937_27
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28756..29958
DNA (1203bp) protein (401aa)
O-antigen ligase n=1 Tax=Clostridium sp. MSTE9 RepID=J0MZI7_9CLOT
O-antigen ligase {ECO:0000313|EMBL:EJF39849.1}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
O-antigen polymerase
L1_008_000M1_scaffold_937_28
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30154..30684
DNA (531bp) protein (177aa)
isochorismatase (EC:3.3.2.1)
Uncharacterized protein n=2 Tax=Clostridium RepID=A7VSM9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDO61175.1}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
L1_008_000M1_scaffold_937_29
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31252..31908
DNA (657bp) protein (219aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B0P7A2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO23710.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L1_008_000M1_scaffold_937_30
unknown

Not on your lists

32037..32270
DNA (234bp) protein (78aa)

This feature has no annotations

Displaying 30 items

View Taxonomy