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L1_008_000M1_scaffold_470_25

Organism: dasL1_008_000M1_concoct_10_sub_fa

near complete RP 46 / 55 MC: 8 BSCG 50 / 51 MC: 7 ASCG 14 / 38 MC: 3
Location: 23892..24377

Top 3 Functional Annotations

Value Algorithm Source
Sigma-70 region 2 n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EH66_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 58.0
  • Coverage: 150.0
  • Bit_score: 173
  • Evalue 1.00e-40
Sigma-70 region 2 {ECO:0000313|EMBL:EEG29153.1}; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] methylpentosum DSM 5476.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 58.0
  • Coverage: 150.0
  • Bit_score: 173
  • Evalue 1.40e-40
sigma-70 family RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 52.6
  • Coverage: 152.0
  • Bit_score: 165
  • Evalue 8.00e-39

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Taxonomy

[Clostridium] methylpentosum → Ruminiclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 486
ATGGAGCAGCCGTACCGTCCCCCGACGCCGGAGGAGGCCGTCGGGCAGTACGGGGACCTTGTCTACCGCCTGGCATATGCCAAAACGGGCAGCCGGTCTGACGCGGACGACATTTACCAGGAGGTTTTTCTGCGCTATCTGCGCAAAAAGCCGCAGCTGGAAAGCGAGGAGCACGCGAAGGCGTGGTTCCTCCGCGTCACCATCAACTGCATGAAGAGCTTCTGGGGCTCGTCGTTCCGCCGCCGCAGCGTCCCGCTTGACGAATCGCTGCCGACGGAGGATCACCCCTCGGACGGCACGATGGAATCGTATCTGCGCCGTCTGCCGGAGCAGTACCGTTCGGTCATCCACCTGTTCTATTATGAAGATTTGCCCACGGCGGAAATTGCAAACATTTTGCGCCGCCGCGAAACGACTGTCCGCGTTCAGCTTATGCGGGCGCGGCAGATGATCAAAGACATGATGGAAAAGGAGGAGGATCTATGA
PROTEIN sequence
Length: 162
MEQPYRPPTPEEAVGQYGDLVYRLAYAKTGSRSDADDIYQEVFLRYLRKKPQLESEEHAKAWFLRVTINCMKSFWGSSFRRRSVPLDESLPTEDHPSDGTMESYLRRLPEQYRSVIHLFYYEDLPTAEIANILRRRETTVRVQLMRARQMIKDMMEKEEDL*