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L1_008_000M1_scaffold_301_29

Organism: dasL1_008_000M1_concoct_10_sub_fa

near complete RP 46 / 55 MC: 8 BSCG 50 / 51 MC: 7 ASCG 14 / 38 MC: 3
Location: comp(37398..37925)

Top 3 Functional Annotations

Value Algorithm Source
DNA-binding helix-turn-helix protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NZN1_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 59.4
  • Coverage: 170.0
  • Bit_score: 200
  • Evalue 1.10e-48
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EDM98880.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 59.4
  • Coverage: 170.0
  • Bit_score: 200
  • Evalue 1.60e-48
DNA-binding protein similarity KEGG
DB: KEGG
  • Identity: 34.3
  • Coverage: 181.0
  • Bit_score: 83
  • Evalue 5.60e-14

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Taxonomy

Pseudoflavonifractor capillosus → Pseudoflavonifractor → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 528
ATGATGTTTCATGAAAAGCTCCAGCGGCTTCGTAAAGCGAACGGGCTTTCGCAGGAGCAGTTGGCAGAGAAACTGGACGTATCGAGACAGGCTGTTTCCAAGTGGGAAACAGGAACGGTTCCGGACAGGAATAATCTGTTGAAGATCAGCCGCTTCTTCCATTGTTCTCTCGATGCTCTGATGGATGATGAGGCTGATGAGATCGGCGAAAAAACGCCGGGCTTTCAGGAGAATGCGCAGGCTGCGCCAAAAAAGCGCGGCCTCAGAGCTTTTTCGGTGGCGGGCGCAGCTGCTGCGGCCCTTGGAGCTGTGGGAATTCTGCTCATCGGCATTTTCAGTTCCGTCTATCCCGCCGTCGTCTATGATCCGCCGCAGGGCGAAGTCAGAGCCATCCTGGAAACCGGACTGGGAGCTTTTTTGAAGGTTCATAACCTCACATGGCTGTTTCTTTTATGTGTGGGATTGATTTCCGCCGGGATTCTGACCGCGCTTTTCCCAAGCCTGCGCCGGTTTTGGAACGGTAAATAG
PROTEIN sequence
Length: 176
MMFHEKLQRLRKANGLSQEQLAEKLDVSRQAVSKWETGTVPDRNNLLKISRFFHCSLDALMDDEADEIGEKTPGFQENAQAAPKKRGLRAFSVAGAAAAALGAVGILLIGIFSSVYPAVVYDPPQGEVRAILETGLGAFLKVHNLTWLFLLCVGLISAGILTALFPSLRRFWNGK*