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L1_008_000M1_scaffold_301

Search features with annotation key words

Displaying items 1-30 of 45 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_301_1
Firmicutes bacterium CAG:94, Firmicutes, Bacteria

Not on your lists

comp(202..897)
DNA (696bp) protein (232aa)
Carboxymuconolactone decarboxylase family protein n=1 Tax=Firmicutes bacterium CAG:94 RepID=R6Y8L6_9FIRM
Carboxymuconolactone decarboxylase family protein {ECO:0000313|EMBL:CDD30270.1}; TaxID=1262989 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:94.;"
carboxymuconolactone decarboxylase
L1_008_000M1_scaffold_301_2
Clostridium sp. CAG:411, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(920..1417)
DNA (498bp) protein (166aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:411 RepID=R7HTD0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE42223.1}; TaxID=1262802 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:411.;"
cupin domain-containing protein
L1_008_000M1_scaffold_301_3
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1634..2515)
DNA (882bp) protein (294aa)
ABC-type transporter, integral membrane subunit n=1 Tax=Clostridium sp. DL-VIII RepID=G7M773_9CLOT
ABC-type transporter, integral membrane subunit {ECO:0000313|EMBL:EHJ01904.1}; Flags: Precursor;; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
ABC-type sugar transport system, permease component
L1_008_000M1_scaffold_301_4
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2536..3462)
DNA (927bp) protein (309aa)
sugar ABC transporter permease n=1 Tax=Clostridium arbusti RepID=UPI000289C6DC
ABC-type polysaccharide transport system, permease component
ABC-type polysaccharide transport system, permease component {ECO:0000313|EMBL:AGK98684.1}; Flags: Precursor;; TaxID=86416 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum BC1.;"
L1_008_000M1_scaffold_301_5
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

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comp(3554..5263)
DNA (1710bp) protein (570aa)
Sugar ABC transporter substrate-binding protein n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5GWP7_9FIRM
Sugar ABC transporter substrate-binding protein {ECO:0000313|EMBL:CCY21638.1}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
hypothetical protein
L1_008_000M1_scaffold_301_6
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5469..6980
DNA (1512bp) protein (504aa)
Response regulator receiver domain protein n=1 Tax=Clostridium sp. CAG:277 RepID=R7JZ57_9CLOT
Response regulator receiver domain protein {ECO:0000313|EMBL:CDE68946.1}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
two component transcriptional regulator, AraC family
L1_008_000M1_scaffold_301_7
Paenibacillus sp. FSL H7-0737, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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7048..8688
DNA (1641bp) protein (547aa)
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Clostridium sp. DL-VIII RepID=G7M776_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIQ21668.1}; TaxID=1536775 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. FSL H7-0737.;"
L1_008_000M1_scaffold_301_8
unknown

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comp(8601..8840)
DNA (240bp) protein (80aa)

This feature has no annotations

L1_008_000M1_scaffold_301_9
unknown

Not on your lists

comp(8844..9308)
DNA (465bp) protein (155aa)

This feature has no annotations

L1_008_000M1_scaffold_301_10
Clostridium sp. CAG:1013, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9697..10794
DNA (1098bp) protein (366aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:1013 RepID=R5A8G5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX38184.1}; TaxID=1262769 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1013.;"
hypothetical protein
L1_008_000M1_scaffold_301_11
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10881..11555)
DNA (675bp) protein (225aa)
Putative uncharacterized protein (Fragment) n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C6H9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO35813.1}; Flags: Fragment;; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
transglutaminase domain-containing protein
L1_008_000M1_scaffold_301_12
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11748..13097)
DNA (1350bp) protein (450aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RYI1_9FIRM
Capsular biosynthesis protein {ECO:0000313|EMBL:KJF41364.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
Putative enzyme of poly-gamma-glutamate biosynthesis (capsule formation)
L1_008_000M1_scaffold_301_13
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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13712..14629
DNA (918bp) protein (306aa)
BclB domain-containing protein n=1 Tax=Erysipelotrichaceae bacterium CAG:64 RepID=R6VV98_9FIRM
BclB domain-containing protein {ECO:0000313|EMBL:CDC86172.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
collagen triple helix repeat protein
L1_008_000M1_scaffold_301_14
Treponema lecithinolyticum, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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comp(14793..16244)
DNA (1452bp) protein (484aa)
Arylsulfatase n=1 Tax=Treponema lecithinolyticum ATCC 700332 RepID=U2K7U2_TRELE
Arylsulfatase {ECO:0000313|EMBL:ERJ94551.1}; TaxID=1321815 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema lecithinolyticum ATCC 700332.;"
N-acetylgalactosamine 6-sulfate sulfatase
L1_008_000M1_scaffold_301_15
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16259..17665)
DNA (1407bp) protein (469aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9XMT9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY96956.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
sulfatase
L1_008_000M1_scaffold_301_16
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(17774..19336)
DNA (1563bp) protein (521aa)
Lipoprotein LipO n=2 Tax=Clostridium RepID=D3AE91_9CLOT
Putative bacterial extracellular solute-binding protein {ECO:0000313|EMBL:CCZ58150.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
sugar ABC transporter substrate-binding protein
L1_008_000M1_scaffold_301_17
Treponema lecithinolyticum, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(19391..20281)
DNA (891bp) protein (297aa)
Uncharacterized protein n=1 Tax=Treponema lecithinolyticum ATCC 700332 RepID=U2M5H7_TRELE
Uncharacterized protein {ECO:0000313|EMBL:ERJ94553.1}; TaxID=1321815 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema lecithinolyticum ATCC 700332.;"
ABC transporter permease
L1_008_000M1_scaffold_301_18
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(20281..21240)
DNA (960bp) protein (320aa)
ABC transporter, permease protein n=2 Tax=Clostridium RepID=D3AE93_9CLOT
ABC transporter, permease protein {ECO:0000313|EMBL:EFC99865.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
CUT1 family carbohydrate ABC transporter membrane protein 1
L1_008_000M1_scaffold_301_19
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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21797..24022
DNA (2226bp) protein (742aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9XMU3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY96961.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
hypothetical protein
L1_008_000M1_scaffold_301_20
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24152..25819
DNA (1668bp) protein (556aa)
DAK2 domain fusion protein YloV n=1 Tax=Clostridium sp. MSTE9 RepID=J1H999_9CLOT
DAK2 domain fusion protein YloV {ECO:0000313|EMBL:EJF42210.1}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
DAK2 domain fusion protein YloV
L1_008_000M1_scaffold_301_21
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25836..28013
DNA (2178bp) protein (726aa)
recG; ATP-dependent DNA helicase RecG (EC:3.6.4.12)
ATP-dependent DNA helicase RecG n=1 Tax=Clostridium leptum CAG:27 RepID=R6N3R1_9CLOT
ATP-dependent DNA helicase RecG {ECO:0000313|EMBL:CDC05675.1}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
L1_008_000M1_scaffold_301_22
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(28381..29328)
DNA (948bp) protein (316aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5I9G9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI61708.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
transcriptional regulator, MerR family
L1_008_000M1_scaffold_301_23
Eubacterium limosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(29723..30907)
DNA (1185bp) protein (395aa)
hypothetical protein n=1 Tax=Zymophilus raffinosivorans RepID=UPI00037D36F7
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADO38338.1}; TaxID=903814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium limosum (strain KIST612).;"
L1_008_000M1_scaffold_301_24
[Clostridium] cellulosi, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(31103..31981)
DNA (879bp) protein (293aa)
PP-loop domain protein n=1 Tax=Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) RepID=F2JRP1_CELLD
PP-loop domain-containing protein
PP-loop domain-containing protein {ECO:0000313|EMBL:CDZ24077.1}; TaxID=29343 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] cellulosi.;"
L1_008_000M1_scaffold_301_25
Clostridium sp. CAG:43, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32341..33516
DNA (1176bp) protein (392aa)
Aminotransferase class I/II n=1 Tax=Clostridium sp. CAG:43 RepID=R7ACN1_9CLOT
Aminotransferase class I/II {ECO:0000313|EMBL:CDD58513.1}; TaxID=1262805 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:43.;"
class I and II aminotransferase
L1_008_000M1_scaffold_301_26
Ethanoligenens harbinense, Ethanoligenens, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(33540..34736)
DNA (1197bp) protein (399aa)
LPXTG-motif cell wall anchor domain protein n=1 Tax=Ethanoligenens harbinense (strain DSM 18485 / JCM 12961 / CGMCC 1.5033 / YUAN-3) RepID=E6U966_ETHHY
LPXTG-motif cell wall anchor domain-containing protein
LPXTG-motif cell wall anchor domain protein {ECO:0000313|EMBL:ADU27225.1}; TaxID=663278 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ethanoligenens.;" source="Ethanoligenens harbinense (strain DSM 18485 / JCM 12961 / CGMCC 1.5033; / YUAN-3).;"
L1_008_000M1_scaffold_301_27
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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35062..36318
DNA (1257bp) protein (419aa)
GTPase HflX n=1 Tax=Clostridium sporosphaeroides RepID=UPI000374079A
GTPase HflX {ECO:0000256|HAMAP-Rule:MF_00900}; GTP-binding protein HflX {ECO:0000256|HAMAP-Rule:MF_00900}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
GTP-binding protein HflX
L1_008_000M1_scaffold_301_28
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(36373..37290)
DNA (918bp) protein (306aa)
DNA-binding helix-turn-helix protein n=2 Tax=Oscillibacter RepID=U2QLN2_9FIRM
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:ERK66453.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
putative Xre family DNA-binding protein
L1_008_000M1_scaffold_301_29
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(37398..37925)
DNA (528bp) protein (176aa)
DNA-binding helix-turn-helix protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NZN1_9FIRM
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EDM98880.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
DNA-binding protein
L1_008_000M1_scaffold_301_30
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(38163..41711)
DNA (3549bp) protein (1183aa)
Pyruvate-flavodoxin oxidoreductase {ECO:0000256|PIRNR:PIRNR000159}; EC=1.2.7.- {ECO:0000256|PIRNR:PIRNR000159};; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
nifJ3; Pyruvate-flavodoxin oxidoreductase (EC:1.2.7.-)
Pyruvate-flavodoxin oxidoreductase n=1 Tax=Clostridium leptum DSM 753 RepID=A7VV50_9CLOT
Displaying items 1-30 of 45 in total

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