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L1_008_000M1_scaffold_42

Search features with annotation key words

Displaying items 1-30 of 167 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_42_1
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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879..2912
DNA (2034bp) protein (678aa)
ABC transporter, ATP-binding protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4ECE1_9ACTN
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EBA38841.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
ABC transporter
L1_008_000M1_scaffold_42_2
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

2899..3195
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZI09_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CDA36224.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
hypothetical protein
L1_008_000M1_scaffold_42_3
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

3205..3888
DNA (684bp) protein (228aa)
Peptidase M50 family n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z959_9ACTN
Peptidase M50 family {ECO:0000313|EMBL:CDA36223.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
peptidase M50
L1_008_000M1_scaffold_42_4
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

3973..4785
DNA (813bp) protein (271aa)
ScpA/B protein n=1 Tax=Collinsella sp. CAG:166 RepID=R6A514_9ACTN
ScpA/B protein {ECO:0000313|EMBL:KGI72960.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
condensin subunit ScpA
L1_008_000M1_scaffold_42_5
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

4797..5516
DNA (720bp) protein (240aa)
Segregation and condensation protein B n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4ECD7_9ACTN
Segregation and condensation protein B {ECO:0000256|SAAS:SAAS00086417}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
condensin subunit ScpB
L1_008_000M1_scaffold_42_6
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

5503..6477
DNA (975bp) protein (325aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
ribosomal large subunit pseudouridine synthase B (EC:5.4.99.-)
Pseudouridine synthase n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZBH0_9ACTN
L1_008_000M1_scaffold_42_7
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

6545..7231
DNA (687bp) protein (229aa)
Cytidylate kinase {ECO:0000256|HAMAP-Rule:MF_00238}; Short=CK {ECO:0000256|HAMAP-Rule:MF_00238};; EC=2.7.4.25 {ECO:0000256|HAMAP-Rule:MF_00238};; Cytidine monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_00238}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
cytidylate kinase (EC:2.7.4.14)
Cytidylate kinase n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4ECD5_9ACTN
L1_008_000M1_scaffold_42_8
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

7235..7963
DNA (729bp) protein (243aa)
1-acyl-sn-glycerol-3-phosphate acyltransferase (EC:2.3.1.51)
Acyltransferase n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4ECD4_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI72964.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
L1_008_000M1_scaffold_42_9
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

7966..8865
DNA (900bp) protein (300aa)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570}; EC=1.17.1.2 {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570};; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
hydroxymethylbutenyl pyrophosphate reductase (EC:1.17.1.2)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4ECD3_9ACTN
L1_008_000M1_scaffold_42_10
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

8868..10310
DNA (1443bp) protein (481aa)
Putative FeS-containing Cyanobacterial-specific oxidoreductase n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4ECD2_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI72966.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
hypothetical protein
L1_008_000M1_scaffold_42_11
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

10321..11655
DNA (1335bp) protein (445aa)
GTPase Der n=2 Tax=Collinsella RepID=A4ECD1_9ACTN
GTPase Der {ECO:0000256|HAMAP-Rule:MF_00195, ECO:0000256|RuleBase:RU004481}; GTP-binding protein EngA {ECO:0000256|HAMAP-Rule:MF_00195}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
ribosome-associated GTPase EngA
L1_008_000M1_scaffold_42_12
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

11648..12331
DNA (684bp) protein (228aa)
Glycerol-3-phosphate acyltransferase n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4ECD0_9ACTN
Glycerol-3-phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Acyl-PO4 G3P acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Acyl-phosphate--glycerol-3-phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; G3P acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Lysophosphatidic acid synthase {ECO:0000256|HAMAP-Rule:MF_01043}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
acyl-phosphate glycerol-3-phosphate acyltransferase
L1_008_000M1_scaffold_42_13
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

12341..13348
DNA (1008bp) protein (336aa)
Glycerol-3-phosphate dehydrogenase [NAD(P)+] {ECO:0000256|HAMAP-Rule:MF_00394}; EC=1.1.1.94 {ECO:0000256|HAMAP-Rule:MF_00394};; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00394}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
Glycerol-3-phosphate dehydrogenase [NAD(P)+] n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4ECC9_9ACTN
NAD-dependent glycerol-3-phosphate dehydrogenase domain-containing protein
L1_008_000M1_scaffold_42_14
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

13367..14038
DNA (672bp) protein (224aa)
Ribulose-phosphate 3-epimerase {ECO:0000256|PIRNR:PIRNR001461}; EC=5.1.3.1 {ECO:0000256|PIRNR:PIRNR001461};; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
ribulose-5-phosphate 3-epimerase (EC:5.1.3.1)
Ribulose-phosphate 3-epimerase n=1 Tax=Collinsella sp. CAG:166 RepID=R6A503_9ACTN
L1_008_000M1_scaffold_42_15
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

14045..15223
DNA (1179bp) protein (393aa)
Cysteine desulfurase (EC:2.8.1.7)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZPA6_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CDA36211.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
L1_008_000M1_scaffold_42_16
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

15220..16029
DNA (810bp) protein (270aa)
Putative dinuclear metal center protein, YbgI family n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4ECC5_9ACTN
Putative dinuclear metal center protein, YbgI family {ECO:0000313|EMBL:EBA38825.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
hypothetical protein
L1_008_000M1_scaffold_42_17
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

16026..16745
DNA (720bp) protein (240aa)
Putative zinc ribbon domain protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4ECC4_9ACTN
Putative zinc ribbon domain protein {ECO:0000313|EMBL:EBA38824.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
hypothetical protein
L1_008_000M1_scaffold_42_18
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

16749..17960
DNA (1212bp) protein (404aa)
Phosphopantothenoylcysteine decarboxylase; Phosphopantothenate-cysteine ligase (EC:4.1.1.36 6.3.2.5)
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z941_9ACTN
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate-cysteine ligase {ECO:0000313|EMBL:KGI72974.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
L1_008_000M1_scaffold_42_19
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(18646..19653)
DNA (1008bp) protein (336aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4ECC2_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EBA38822.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
hypothetical protein
L1_008_000M1_scaffold_42_20
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(19907..20530)
DNA (624bp) protein (208aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4ECC2_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EBA38822.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
L1_008_000M1_scaffold_42_21
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

20884..23130
DNA (2247bp) protein (749aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4ECC1_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EBA38821.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
hypothetical protein
L1_008_000M1_scaffold_42_22
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(23085..23312)
DNA (228bp) protein (76aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4ECC0_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EBA38820.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
hypothetical protein
L1_008_000M1_scaffold_42_23
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(23581..24327)
DNA (747bp) protein (249aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4ECB8_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EBA38817.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
hypothetical protein
L1_008_000M1_scaffold_42_24
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

24607..24975
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4ECB6_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EBA38816.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
hypothetical protein
L1_008_000M1_scaffold_42_25
unknown

Not on your lists

24989..25093
DNA (105bp) protein (35aa)

This feature has no annotations

L1_008_000M1_scaffold_42_26
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

25176..25346
DNA (171bp) protein (57aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4ECB4_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EBA38814.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
L1_008_000M1_scaffold_42_27
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

25594..25833
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4ED68_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EBA38499.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
L1_008_000M1_scaffold_42_28
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(25956..26063)
DNA (108bp) protein (36aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R6A5Q7_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CDA36447.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
L1_008_000M1_scaffold_42_29
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(26283..26711)
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZPZ0_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CDA36446.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
hypothetical protein
L1_008_000M1_scaffold_42_30
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(26713..28527)
DNA (1815bp) protein (605aa)
ABC transporter, ATP-binding protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EAB0_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI74929.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
ABC transporter
Displaying items 1-30 of 167 in total

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