ggKbase home page

L1_008_000M1_scaffold_51

Search features with annotation key words

Displaying items 31-60 of 151 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_51_31
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

37555..38064
DNA (510bp) protein (170aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E7Z2_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EBA40008.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
L1_008_000M1_scaffold_51_32
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

38154..38753
DNA (600bp) protein (200aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z8Z4_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CDA36158.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
L1_008_000M1_scaffold_51_33
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

38737..39018
DNA (282bp) protein (94aa)
LPXTG-motif cell wall anchor domain protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E7Z4_9ACTN
LPXTG-motif cell wall anchor domain protein {ECO:0000313|EMBL:EBA40010.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
L1_008_000M1_scaffold_51_34
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

39037..40467
DNA (1431bp) protein (477aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E7Z6_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI75344.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
L1_008_000M1_scaffold_51_35
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

40586..41302
DNA (717bp) protein (239aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E7Z7_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI75343.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
membrane protein
L1_008_000M1_scaffold_51_36
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

41391..43151
DNA (1761bp) protein (587aa)
Conserved domain protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E7Z8_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI75342.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
hypothetical protein
L1_008_000M1_scaffold_51_37
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

43144..44448
DNA (1305bp) protein (435aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E7Z9_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI75341.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
biotin carboxylase
L1_008_000M1_scaffold_51_38
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

44565..47009
DNA (2445bp) protein (815aa)
DEAD/DEAH box helicase n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6G947_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI75340.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
DEAD/DEAH box helicase domain protein
L1_008_000M1_scaffold_51_39
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(47036..47914)
DNA (879bp) protein (293aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E803_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EBA40019.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
spermine synthase
L1_008_000M1_scaffold_51_40
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(47915..49822)
DNA (1908bp) protein (636aa)
Histone acetyltransferase (EC:2.3.1.48)
Histone acetyltransferase, ELP3 family n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E804_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI75338.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
L1_008_000M1_scaffold_51_41
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(49922..50659)
DNA (738bp) protein (246aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E805_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EBA40021.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
hypothetical protein
L1_008_000M1_scaffold_51_42
Collinsella sp. CAG:289, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(50670..50822)
DNA (153bp) protein (51aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:289 RepID=R7D3R6_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CDD85254.1}; TaxID=1262851 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:289.;"
L1_008_000M1_scaffold_51_43
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(50819..51535)
DNA (717bp) protein (239aa)
DNA-binding helix-turn-helix protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E806_9ACTN
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EBA40022.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
helix-turn-helix domain-containing protein
L1_008_000M1_scaffold_51_44
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

51680..52675
DNA (996bp) protein (332aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E807_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EBA40023.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
hypothetical protein
L1_008_000M1_scaffold_51_45
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

52794..53633
DNA (840bp) protein (280aa)
tRNA (guanine-N(7)-)-methyltransferase (EC:2.1.1.33)
Putative tRNA (Guanine-N(7)-)-methyltransferase n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E808_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI75334.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
L1_008_000M1_scaffold_51_46
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

53785..56625
DNA (2841bp) protein (947aa)
DEAD/DEAH box helicase n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E809_9ACTN
DEAD/DEAH box helicase {ECO:0000313|EMBL:EBA40025.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
DEAD/DEAH box helicase
L1_008_000M1_scaffold_51_47
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(56705..58462)
DNA (1758bp) protein (586aa)
Prevent-host-death family protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z916_9ACTN
Prevent-host-death family protein {ECO:0000313|EMBL:CDA35340.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
hypothetical protein
L1_008_000M1_scaffold_51_48
Collinsella stercoris, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(58602..59366)
DNA (765bp) protein (255aa)
YdjC-like protein n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6G900_9ACTN
YdjC-like protein {ECO:0000313|EMBL:EEA91197.1}; TaxID=445975 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella stercoris DSM 13279.;"
PTS sugar transporter
L1_008_000M1_scaffold_51_49
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(59434..59979)
DNA (546bp) protein (182aa)
Ser/Thr phosphatase family protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E813_9ACTN
Ser/Thr phosphatase family protein {ECO:0000313|EMBL:EBA40029.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
putative phosphoesterase or phosphohydrolase
L1_008_000M1_scaffold_51_50
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(60046..60225)
DNA (180bp) protein (60aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z6J9_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CDA35338.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
L1_008_000M1_scaffold_51_51
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(60244..60570)
DNA (327bp) protein (109aa)
HIRAN domain protein n=1 Tax=Collinsella sp. CAG:166 RepID=R6A2D7_9ACTN
HIRAN domain protein {ECO:0000313|EMBL:CDA35337.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
DegQ; trypsin-like serine protease
L1_008_000M1_scaffold_51_52
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(60993..62372)
DNA (1380bp) protein (460aa)
NAD-dependent aldehyde dehydrogenases (EC:1.2.1.3 1.2.1.5)
Aldehyde dehydrogenase n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZM31_9ACTN
Aldehyde dehydrogenase {ECO:0000256|PIRNR:PIRNR036492}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
L1_008_000M1_scaffold_51_53
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(62381..63601)
DNA (1221bp) protein (407aa)
Alcohol dehydrogenase iron-dependent n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z910_9ACTN
Alcohol dehydrogenase iron-dependent {ECO:0000313|EMBL:CDA35335.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
alcohol dehydrogenase
L1_008_000M1_scaffold_51_54
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

63858..64418
DNA (561bp) protein (187aa)
Rubredoxin n=2 Tax=Collinsella RepID=A4E818_9ACTN
Rubredoxin {ECO:0000313|EMBL:CDA35334.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
rubrerythrin
L1_008_000M1_scaffold_51_55
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(64661..65788)
DNA (1128bp) protein (376aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z6J3_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CDA35333.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
L1_008_000M1_scaffold_51_56
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(66085..67521)
DNA (1437bp) protein (479aa)
Transcriptional regulator, GntR family n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E821_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI75390.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
GntR family transcriptional regulator
L1_008_000M1_scaffold_51_57
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

67625..68557
DNA (933bp) protein (311aa)
Pyridoxal 5'-phosphate synthase subunit PdxS {ECO:0000256|HAMAP-Rule:MF_01824}; Short=PLP synthase subunit PdxS {ECO:0000256|HAMAP-Rule:MF_01824};; EC=4.3.3.6 {ECO:0000256|HAMAP-Rule:MF_01824};; Pdx1 {ECO:0000256|HAMAP-Rule:MF_01824}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
pyridoxal phosphate synthase yaaD subunit (EC:4.-.-.-)
Pyridoxal biosynthesis lyase PdxS n=2 Tax=Collinsella RepID=A4E822_9ACTN
L1_008_000M1_scaffold_51_58
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

68578..69165
DNA (588bp) protein (196aa)
Pyridoxal 5'-phosphate synthase subunit PdxT {ECO:0000256|HAMAP-Rule:MF_01615}; EC=4.3.3.6 {ECO:0000256|HAMAP-Rule:MF_01615};; Pdx2 {ECO:0000256|HAMAP-Rule:MF_01615}; Pyridoxal 5'-phosphate synthase glutaminase subunit {ECO:0000256|HAMAP-Rule:MF_01615}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
pdxT; pyridoxal 5'-phosphate synthase, glutaminase subunit Pdx2 (EC:2.6.-.-)
Glutamine amidotransferase subunit PdxT n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E823_9ACTN
L1_008_000M1_scaffold_51_59
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(69548..70459)
DNA (912bp) protein (304aa)
Conserved domain protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E828_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI75416.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
hypothetical protein
L1_008_000M1_scaffold_51_60
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(70612..71961)
DNA (1350bp) protein (450aa)
Transporter major facilitator family protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZIX8_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI75415.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
EmrB/QacA subfamily drug resistance transporter
Displaying items 31-60 of 151 in total

View Taxonomy