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L1_008_000M1_scaffold_51

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Displaying items 1-30 of 151 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_51_1
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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comp(460..819)
DNA (360bp) protein (120aa)
50S ribosomal protein L20 n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E7V6_9ACTN
50S ribosomal protein L20 {ECO:0000256|HAMAP-Rule:MF_00382, ECO:0000256|RuleBase:RU000560}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
LSU ribosomal protein L20P
L1_008_000M1_scaffold_51_2
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists


comp(866..1057)
DNA (192bp) protein (64aa)
50S ribosomal protein L35 n=2 Tax=Collinsella RepID=A4E7V7_9ACTN
50S ribosomal protein L35 {ECO:0000256|HAMAP-Rule:MF_00514, ECO:0000256|RuleBase:RU000568}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
LSU ribosomal protein L35P
L1_008_000M1_scaffold_51_3
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(1090..1659)
DNA (570bp) protein (190aa)
Translation initiation factor IF-3 n=2 Tax=Collinsella RepID=A4E7V8_9ACTN
Translation initiation factor IF-3 {ECO:0000256|HAMAP-Rule:MF_00080}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
translation initiation factor 3 (bIF-3)
L1_008_000M1_scaffold_51_4
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(2217..3686)
DNA (1470bp) protein (490aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZE09_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI75373.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
hypothetical protein
L1_008_000M1_scaffold_51_5
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(4001..4867)
DNA (867bp) protein (289aa)
fructose-1,6-bisphosphate aldolase (EC:4.1.2.13)
Fructose-1,6-bisphosphate aldolase, class II n=2 Tax=Collinsella RepID=A4E7W2_9ACTN
Fructose-1 6-bisphosphate aldolase class II {ECO:0000313|EMBL:CDA37072.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
L1_008_000M1_scaffold_51_6
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(5062..5745)
DNA (684bp) protein (228aa)
Metallo-beta-lactamase domain protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E7W3_9ACTN
Metallo-beta-lactamase domain protein {ECO:0000313|EMBL:EBA39979.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
beta-lactamase domain-containing protein
L1_008_000M1_scaffold_51_7
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(5834..8194)
DNA (2361bp) protein (787aa)
(p)ppGpp synthetase I SpoT/RelA (EC:2.7.6.5)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZBG0_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI75370.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
L1_008_000M1_scaffold_51_8
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(8210..11497)
DNA (3288bp) protein (1096aa)
exonuclease RecJ (EC:3.1.-.-)
Single-stranded-DNA-specific exonuclease RecJ n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E7W6_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI75369.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
L1_008_000M1_scaffold_51_9
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

11772..12770
DNA (999bp) protein (333aa)
Sodium bile acid symporter family protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E7W7_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI75368.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
Predicted Na+-dependent transporter
L1_008_000M1_scaffold_51_10
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(12801..13598)
DNA (798bp) protein (266aa)
Galactose-1-phosphate uridylyltransferase (EC:2.7.7.10)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZP45_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI75367.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
L1_008_000M1_scaffold_51_11
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(13602..14279)
DNA (678bp) protein (226aa)
CutC family protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E7W9_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI75366.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
copper homeostasis protein
L1_008_000M1_scaffold_51_12
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(14455..15168)
DNA (714bp) protein (238aa)
ABC transporter, ATP-binding protein n=2 Tax=Collinsella RepID=A4E7X0_9ACTN
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CDA36143.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
amino acid ABC transporter ATP-binding protein
L1_008_000M1_scaffold_51_13
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(15169..16029)
DNA (861bp) protein (287aa)
ABC transporter, ATP-binding protein n=2 Tax=Collinsella RepID=A4E7X1_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI75364.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
branched-chain amino acid ABC transporter ATP-binding protein
L1_008_000M1_scaffold_51_14
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(16019..17098)
DNA (1080bp) protein (360aa)
Branched-chain amino acid ABC transporter, permease protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E7X2_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI75363.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
amino acid ABC transporter permease
L1_008_000M1_scaffold_51_15
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(17108..17989)
DNA (882bp) protein (294aa)
Branched-chain amino acid ABC transporter permease protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZP48_9ACTN
Branched-chain amino acid ABC transporter permease protein {ECO:0000313|EMBL:CDA36146.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
amino acid ABC transporter permease
L1_008_000M1_scaffold_51_16
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(18129..19316)
DNA (1188bp) protein (396aa)
Receptor family ligand-binding protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E7X4_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI75361.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
amino acid ABC transporter substrate-binding protein
L1_008_000M1_scaffold_51_17
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

19793..21136
DNA (1344bp) protein (448aa)
Homoserine dehydrogenase {ECO:0000256|RuleBase:RU000579}; EC=1.1.1.3 {ECO:0000256|RuleBase:RU000579};; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
Homoserine dehydrogenase n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E7X6_9ACTN
homoserine dehydrogenase
L1_008_000M1_scaffold_51_18
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

21354..22103
DNA (750bp) protein (250aa)
Bile acid 7-dehydroxylase 1/3 n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E7X7_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI75359.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
hypothetical protein
L1_008_000M1_scaffold_51_19
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(22225..23787)
DNA (1563bp) protein (521aa)
Transporter, CPA2 family n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E7X8_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI75358.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
hypothetical protein
L1_008_000M1_scaffold_51_20
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

23879..27718
DNA (3840bp) protein (1280aa)
Phosphoribosylformylglycinamidine synthase n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZAJ1_9ACTN
Phosphoribosylformylglycinamidine synthase {ECO:0000313|EMBL:CDA35860.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
Phosphoribosylformylglycinamidine synthase
L1_008_000M1_scaffold_51_21
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

27818..28753
DNA (936bp) protein (312aa)
Putative membrane protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E7Y0_9ACTN
Putative membrane protein {ECO:0000313|EMBL:EBA39996.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
Permeases of the drug/metabolite transporter (DMT) superfamily
L1_008_000M1_scaffold_51_22
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(28855..29958)
DNA (1104bp) protein (368aa)
Diguanylate cyclase (GGDEF) domain protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E7Y1_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI75355.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
diguanylate cyclase
L1_008_000M1_scaffold_51_23
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(30185..31207)
DNA (1023bp) protein (341aa)
Putative 2-keto-3-deoxygluconate transporter n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZHV9_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI75354.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
2-keto-3-deoxygluconate permease
L1_008_000M1_scaffold_51_24
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(31349..31672)
DNA (324bp) protein (108aa)
Branched-chain amino acid transport protein (AzlD) n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZBC2_9ACTN
Branched-chain amino acid transport protein (AzlD) {ECO:0000313|EMBL:CDA36150.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
branched-chain amino acid transporter protein
L1_008_000M1_scaffold_51_25
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(31662..32354)
DNA (693bp) protein (231aa)
Putative azaleucine resistance protein AzlC n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZP52_9ACTN
Putative azaleucine resistance protein AzlC {ECO:0000313|EMBL:CDA36151.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
hypothetical protein
L1_008_000M1_scaffold_51_26
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

32481..33293
DNA (813bp) protein (271aa)
HDIG domain protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E7Y5_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI75351.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
hypothetical protein
L1_008_000M1_scaffold_51_27
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(33290..34495)
DNA (1206bp) protein (402aa)
Electron transfer flavoprotein FAD-binding domain protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E7Y6_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI75350.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
electron transfer flavoprotein subunit alpha-like protein
L1_008_000M1_scaffold_51_28
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(34496..35311)
DNA (816bp) protein (272aa)
Electron transfer flavoprotein domain protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZHW2_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI75349.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
electron transfer flavoprotein subunit alpha/beta-like protein
L1_008_000M1_scaffold_51_29
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(35314..36915)
DNA (1602bp) protein (534aa)
D-lactate dehydrogenase (EC:1.1.2.4)
FAD linked oxidase C-terminal domain protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZBC5_9ACTN
FAD linked oxidase C-terminal domain protein {ECO:0000313|EMBL:CDA36155.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
L1_008_000M1_scaffold_51_30
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

37262..37558
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E7Z1_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EBA40007.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
Displaying items 1-30 of 151 in total

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