ggKbase home page

L1_008_000M1_scaffold_111_18

Organism: dasL1_008_000M1_concoct_25_sub_fa

near complete RP 49 / 55 BSCG 51 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: 16700..17212

Top 3 Functional Annotations

Value Algorithm Source
Putative nickel-responsive regulator n=2 Tax=Collinsella RepID=R5Z850_9ACTN similarity UNIREF
DB: UNIREF100
  • Identity: 97.6
  • Coverage: 170.0
  • Bit_score: 346
  • Evalue 1.20e-92
Putative nickel-responsive regulator {ECO:0000256|HAMAP-Rule:MF_00476}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.6
  • Coverage: 170.0
  • Bit_score: 346
  • Evalue 1.70e-92
transcriptional regulator, CopG family similarity KEGG
DB: KEGG
  • Identity: 47.5
  • Coverage: 139.0
  • Bit_score: 148
  • Evalue 1.10e-33

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Collinsella sp. CAG:166 → Collinsella → Coriobacteriales → Coriobacteriia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 513
GTGGCCGAACACGAGCATGGCAGCGGGTACGAGCACGAGCATCCGCACGGGGCGGACGGTGATGCGGGCTGCCACTGTAGTGGCTCCGGCTCCGAGCTGGTCCGCTTTTCGGTTACCGCACCGGACGACCTGCTGCGCCGTTTTGACGAACAGATCGCGCGCCGCGGCGACGTGGCCAACCGCTCCGAGGCCGTGCGCGACCTGATTCGCGCCTCGATCGCCAAAGAGCAGATGCGCACGCCCGATGAGCATGTTATCGGGTCGCTCACCATGATCTACGACCACCATACCGGCGACCTGACGCGCCGTCTGGACGAAGTGCAGCACGACTACACCGACGAGATCGTATCGACCATGCACGTACATCTGGATCACCACAACTGCTTGGAGATCCTGGCGCTCAAGGGTCGCGGCGAGCGCATCTACGAACTGTCCGACCGCCTGCTGGGCCTGCGCGGCGTTAAGCACGGCGAGCTCACGTGCGCCGCCACCAAGCAGAGCCTGGGGCTGTAG
PROTEIN sequence
Length: 171
VAEHEHGSGYEHEHPHGADGDAGCHCSGSGSELVRFSVTAPDDLLRRFDEQIARRGDVANRSEAVRDLIRASIAKEQMRTPDEHVIGSLTMIYDHHTGDLTRRLDEVQHDYTDEIVSTMHVHLDHHNCLEILALKGRGERIYELSDRLLGLRGVKHGELTCAATKQSLGL*