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L1_008_000M1_scaffold_111

Search features with annotation key words

Displaying items 1-30 of 87 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_111_1
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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comp(17..706)
DNA (690bp) protein (230aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZCE9_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CDA36520.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
L1_008_000M1_scaffold_111_2
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(956..3292)
DNA (2337bp) protein (779aa)
Aconitase family protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EA18_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI73630.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
aconitase protein
L1_008_000M1_scaffold_111_3
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(3728..4144)
DNA (417bp) protein (139aa)
Transcriptional regulator, MerR family n=2 Tax=Collinsella RepID=A4EA19_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI74136.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
MerR family transcriptional regulator
L1_008_000M1_scaffold_111_4
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(4217..5182)
DNA (966bp) protein (322aa)
DnaJ domain protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZQA5_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI74135.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
chaperone DnaJ domain-containing protein
L1_008_000M1_scaffold_111_5
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(5291..6133)
DNA (843bp) protein (281aa)
Protein GrpE n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZCE4_9ACTN
Protein GrpE {ECO:0000256|HAMAP-Rule:MF_01151, ECO:0000256|RuleBase:RU000639}; HSP-70 cofactor {ECO:0000256|HAMAP-Rule:MF_01151}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
GrpE protein HSP-70 cofactor
L1_008_000M1_scaffold_111_6
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(6136..8028)
DNA (1893bp) protein (631aa)
chaperone protein DnaK (EC:3.6.1.3)
Chaperone protein DnaK n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EA22_9ACTN
Chaperone protein DnaK {ECO:0000256|HAMAP-Rule:MF_00332}; HSP70 {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock 70 kDa protein {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock protein 70 {ECO:0000256|HAMAP-Rule:MF_00332}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
L1_008_000M1_scaffold_111_7
unknown

Not on your lists

comp(8481..8588)
DNA (108bp) protein (36aa)

This feature has no annotations

L1_008_000M1_scaffold_111_8
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

8624..8809
DNA (186bp) protein (62aa)
4Fe-4S binding domain protein n=2 Tax=Collinsella RepID=A4EA25_9ACTN
4Fe-4S binding domain protein {ECO:0000313|EMBL:CDA36513.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
4Fe-4S ferredoxin iron-sulfur binding domain-containing protein
L1_008_000M1_scaffold_111_9
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(8952..9497)
DNA (546bp) protein (182aa)
3H domain protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EA26_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI74131.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
Predicted small molecule binding protein (contains 3H domain)
L1_008_000M1_scaffold_111_10
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(9497..10357)
DNA (861bp) protein (287aa)
Nicotinate-nucleotide diphosphorylase (Carboxylating) {ECO:0000313|EMBL:EBA39695.1}; EC=2.4.2.19 {ECO:0000313|EMBL:EBA39695.1};; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
Nicotinate-nucleotide diphosphorylase (Carboxylating) n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EA27_9ACTN
nicotinate-nucleotide pyrophosphorylase
L1_008_000M1_scaffold_111_11
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(10361..11737)
DNA (1377bp) protein (459aa)
Aspartate oxidase (EC:1.4.3.16)
FAD binding domain protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EA28_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI74129.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
L1_008_000M1_scaffold_111_12
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(11794..12819)
DNA (1026bp) protein (342aa)
Quinolinate synthase {ECO:0000256|SAAS:SAAS00096027}; EC=2.5.1.72 {ECO:0000256|SAAS:SAAS00096027};; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
Quinolinate synthetase complex A subunit n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZIV1_9ACTN
quinolinate synthetase A
L1_008_000M1_scaffold_111_13
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

13112..13834
DNA (723bp) protein (241aa)
Response regulator receiver domain protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZA14_9ACTN
Response regulator receiver domain protein {ECO:0000313|EMBL:CDA36508.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
Response regulator of the LytR/AlgR family
L1_008_000M1_scaffold_111_14
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

13834..15111
DNA (1278bp) protein (426aa)
Tat pathway signal sequence domain protein n=1 Tax=Collinsella sp. CAG:166 RepID=R6A5Z9_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI74126.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
hypothetical protein
L1_008_000M1_scaffold_111_15
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(15186..15761)
DNA (576bp) protein (192aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EA32_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI74125.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
hypothetical protein
L1_008_000M1_scaffold_111_16
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

15898..16218
DNA (321bp) protein (107aa)
Thioredoxin n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZCD6_9ACTN
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
thioredoxin
L1_008_000M1_scaffold_111_17
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

16450..16698
DNA (249bp) protein (83aa)
Uncharacterized protein n=2 Tax=Collinsella RepID=A4EA34_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EBA39702.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
L1_008_000M1_scaffold_111_18
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

16700..17212
DNA (513bp) protein (171aa)
Putative nickel-responsive regulator n=2 Tax=Collinsella RepID=R5Z850_9ACTN
Putative nickel-responsive regulator {ECO:0000256|HAMAP-Rule:MF_00476}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
transcriptional regulator, CopG family
L1_008_000M1_scaffold_111_19
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

17330..19738
DNA (2409bp) protein (803aa)
Carbamoyltransferase HypF n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EA36_9ACTN
Hydrogenase maturation protein HypF {ECO:0000313|EMBL:KGI74121.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
(NiFe) hydrogenase maturation protein HypF
L1_008_000M1_scaffold_111_20
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

19873..20133
DNA (261bp) protein (87aa)
Hydrogenase assembly chaperone HypC/HupF n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZNC3_9ACTN
Hydrogenase assembly chaperone HypC/HupF {ECO:0000313|EMBL:CDA35866.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
hydrogenase assembly chaperone HypC/HupF
L1_008_000M1_scaffold_111_21
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

20133..21245
DNA (1113bp) protein (371aa)
Hydrogenase expression/formation protein HypD n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZAJ7_9ACTN
Hydrogenase expression/formation protein HypD {ECO:0000313|EMBL:CDA35865.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
hypothetical protein
L1_008_000M1_scaffold_111_22
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

21294..22328
DNA (1035bp) protein (345aa)
Hydrogenase expression/formation protein HypE n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZGZ1_9ACTN
Hydrogenase expression/formation protein HypE {ECO:0000313|EMBL:CDA35864.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
hydrogenase expression/formation protein HypE
L1_008_000M1_scaffold_111_23
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

22452..23120
DNA (669bp) protein (223aa)
Putative phosphoglycolate phosphatase, bacterial n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EA41_9ACTN
Putative phosphoglycolate phosphatase, bacterial {ECO:0000313|EMBL:EBA39709.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
HAD-superfamily hydrolase
L1_008_000M1_scaffold_111_24
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(23422..23979)
DNA (558bp) protein (186aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZQE6_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CDA36571.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
hypothetical protein
L1_008_000M1_scaffold_111_25
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(24213..24749)
DNA (537bp) protein (179aa)
PTS system glucose subfamily IIA component n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZCI4_9ACTN
PTS system glucose subfamily IIA component {ECO:0000313|EMBL:CDA36570.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
Glc family PTS system transporter subunit IIA
L1_008_000M1_scaffold_111_26
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

24927..25490
DNA (564bp) protein (188aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EA48_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EBA39716.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
RpiR family transcriptional regulator
L1_008_000M1_scaffold_111_27
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

25777..26949
DNA (1173bp) protein (391aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZJ03_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI74113.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
filamentation induced by cAMP protein fic
L1_008_000M1_scaffold_111_28
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(27263..27943)
DNA (681bp) protein (227aa)
Orotate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01208, ECO:0000256|SAAS:SAAS00216328}; Short=OPRT {ECO:0000256|HAMAP-Rule:MF_01208};; Short=OPRTase {ECO:0000256|HAMAP-Rule:MF_01208};; EC=2.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01208, ECO:0000256|SAAS:SAAS00216337};; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
Orotate phosphoribosyltransferase n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZA63_9ACTN
orotate phosphoribosyltransferase
L1_008_000M1_scaffold_111_29
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

28383..31151
DNA (2769bp) protein (923aa)
magnesium-translocating P-type ATPase (EC:3.6.3.2)
Magnesium-importing ATPase n=1 Tax=Collinsella sp. CAG:166 RepID=R6A2U5_9ACTN
Magnesium-importing ATPase {ECO:0000313|EMBL:CDA35467.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
L1_008_000M1_scaffold_111_30
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(31333..32877)
DNA (1545bp) protein (515aa)
Transcriptional regulator, LuxR family n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4ED18_9ACTN
Transcriptional regulator, LuxR family {ECO:0000313|EMBL:EBA38506.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
Displaying items 1-30 of 87 in total

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