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L1_008_000M1_scaffold_3039

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_3039_1
Anaerofustis stercorihominis, Anaerofustis, Clostridiales, Clostridia, Firmicutes, Bacteria

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115..900
DNA (786bp) protein (262aa)
DNA-binding helix-turn-helix protein n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1CBT7_9FIRM
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EDS71734.1}; TaxID=445971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Anaerofustis.;" source="Anaerofustis stercorihominis DSM 17244.;"
Predicted transcriptional regulators
L1_008_000M1_scaffold_3039_2
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1108..1632
DNA (525bp) protein (175aa)
50S ribosomal protein L10 n=1 Tax=Clostridium sp. CAG:226 RepID=R5B6K5_9CLOT
50S ribosomal protein L10 {ECO:0000256|HAMAP-Rule:MF_00362, ECO:0000256|RuleBase:RU003636}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
rplJ; 50S ribosomal protein L10
L1_008_000M1_scaffold_3039_3
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1686..2054
DNA (369bp) protein (123aa)
50S ribosomal protein L7/L12 n=1 Tax=Clostridium sp. CAG:226 RepID=R5BIE9_9CLOT
50S ribosomal protein L7/L12 {ECO:0000256|HAMAP-Rule:MF_00368}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
50S ribosomal protein L7/L12
L1_008_000M1_scaffold_3039_4
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2103..2327)
DNA (225bp) protein (75aa)
hypothetical protein n=1 Tax=Desulfitobacterium hafniense RepID=UPI00035F6498
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADL02922.1}; TaxID=610130 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533; / WM1).;"
L1_008_000M1_scaffold_3039_5
Clostridium sp. CAG:557, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2305..2586)
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:557 RepID=R6GGL9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB24563.1}; TaxID=1262819 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:557.;"
L1_008_000M1_scaffold_3039_6
Clostridium bolteae CAG:59, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2905..3528)
DNA (624bp) protein (208aa)
Uncharacterized protein n=7 Tax=Clostridium RepID=A8RHB6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY00071.1}; TaxID=1263064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bolteae CAG:59.;"
Phosphate transport regulator (distant homolog of PhoU)
L1_008_000M1_scaffold_3039_7
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3557..4606)
DNA (1050bp) protein (350aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RT67_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL70570.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
phosphate transporter
L1_008_000M1_scaffold_3039_8
RifOxyA12_full_Proteobacteria_58_15_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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4806..5591
DNA (786bp) protein (262aa)
HAD-superfamily hydrolase, subfamily IIB n=1 Tax=Spirochaeta smaragdinae (strain DSM 11293 / JCM 15392 / SEBR 4228) RepID=E1R5J4_SPISS
HAD-superfamily hydrolase
Tax=RifOxyA12_full_Proteobacteria_58_15_curated
L1_008_000M1_scaffold_3039_9
Ruminococcus champanellensis, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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5588..6661
DNA (1074bp) protein (358aa)
A/G-specific adenine glycosylase (EC:3.2.2.-)
A/G-specific adenine glycosylase {ECO:0000313|EMBL:CBL18075.1}; EC=3.2.2.- {ECO:0000313|EMBL:CBL18075.1};; TaxID=213810 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus champanellensis (strain DSM 18848 / JCM 17042 / 18P13).;"
A/G-specific adenine glycosylase n=1 Tax=Ruminococcus champanellensis (strain DSM 18848 / JCM 17042 / 18P13) RepID=D4LEN0_RUMC1
L1_008_000M1_scaffold_3039_10
Lachnospiraceae bacterium 10-1, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6827..7405)
DNA (579bp) protein (193aa)
glutamine amidotransferase (EC:4.1.3.27)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 10-1 RepID=R9MQK5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS73335.1}; TaxID=1235800 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 10-1.;"
L1_008_000M1_scaffold_3039_11
Peptococcaceae bacterium BRH_c23, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7389..8870)
DNA (1482bp) protein (494aa)
anthranilate synthase component I (EC:4.1.3.27)
Chorismate binding enzyme n=1 Tax=Eubacterium sp. CAG:786 RepID=R5GZE4_9FIRM
Anthranilate synthase subunit I {ECO:0000313|EMBL:KJS48801.1}; TaxID=1629714 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae.;" source="Peptococcaceae bacterium BRH_c23.;"
L1_008_000M1_scaffold_3039_12
unknown

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comp(8898..9056)
DNA (159bp) protein (53aa)

This feature has no annotations

L1_008_000M1_scaffold_3039_13
GWF2_Lentisphaerae_45_14_curated, Lentisphaerae, Bacteria

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comp(9102..10280)
DNA (1179bp) protein (393aa)
chorismate synthase (EC:4.2.3.5)
Chorismate synthase n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=F1TGJ1_9CLOT
Tax=GWF2_Lentisphaerae_45_14_curated
L1_008_000M1_scaffold_3039_14
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10405..11364)
DNA (960bp) protein (320aa)
Oligopeptide transport ATP-binding protein OppF n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CWK3_9CLOT
Oligopeptide transport ATP-binding protein OppF {ECO:0000313|EMBL:KJJ70392.1}; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain
L1_008_000M1_scaffold_3039_15
Lachnospiraceae bacterium 10-1, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11361..11765)
DNA (405bp) protein (135aa)
Oligopeptide/dipeptide ABC transporter, ATP-binding protein domain n=1 Tax=Lachnospiraceae bacterium 10-1 RepID=R9N1W2_9FIRM
Oligopeptide/dipeptide ABC transporter, ATP-binding protein domain {ECO:0000313|EMBL:EOS77038.1}; TaxID=1235800 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 10-1.;"
peptide ABC transporter ATP-binding protein
Displaying 15 items

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