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L1_008_000M1_scaffold_3382

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_3382_1
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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342..1400
DNA (1059bp) protein (353aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5B297_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX49695.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
hypothetical protein
L1_008_000M1_scaffold_3382_2
Oscillibacter valericigenes, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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1567..3354
DNA (1788bp) protein (596aa)
pepF; oligoendopeptidase F (EC:3.4.24.-)
Oligoendopeptidase F {ECO:0000313|EMBL:BAK98452.1}; EC=3.4.24.- {ECO:0000313|EMBL:BAK98452.1};; TaxID=693746 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 /; Sjm18-20).;"
Oligoendopeptidase F n=1 Tax=Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 / Sjm18-20) RepID=G4KX37_OSCVS
L1_008_000M1_scaffold_3382_3
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3367..3687
DNA (321bp) protein (107aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5BE39_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX49696.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
L1_008_000M1_scaffold_3382_4
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3877..4527
DNA (651bp) protein (217aa)
DNA-binding helix-turn-helix protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D7S1_9CLOT
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EEG52630.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
putative Xre family DNA-binding protein
L1_008_000M1_scaffold_3382_5
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4766..5872
DNA (1107bp) protein (369aa)
sodium ion-translocating decarboxylase, beta subunit (EC:4.1.1.41 4.1.1.3)
Sodium ion-translocating decarboxylase beta subunit n=1 Tax=Clostridium sp. CAG:226 RepID=R5BIG6_9CLOT
Sodium ion-translocating decarboxylase beta subunit {ECO:0000313|EMBL:CCX51246.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
L1_008_000M1_scaffold_3382_6
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5885..6025
DNA (141bp) protein (47aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5BEG8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX51247.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
L1_008_000M1_scaffold_3382_7
Lachnospiraceae bacterium A2, Clostridiales, Clostridia, Firmicutes, Bacteria

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6200..6817
DNA (618bp) protein (206aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium A2 RepID=R9KD40_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS44385.1}; TaxID=397290 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium A2.;"
putative DNA-binding protein
L1_008_000M1_scaffold_3382_8
Firmicutes bacterium CAG:341, Firmicutes, Bacteria

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comp(7086..7307)
DNA (222bp) protein (74aa)
Putative transcriptional regulator n=1 Tax=Firmicutes bacterium CAG:341 RepID=R7BEQ4_9FIRM
Putative transcriptional regulator {ECO:0000313|EMBL:CDD64256.1}; TaxID=1263019 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:341.;"
transcriptional regulator, XRE family
L1_008_000M1_scaffold_3382_9
unknown

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7488..7685
DNA (198bp) protein (66aa)

This feature has no annotations

L1_008_000M1_scaffold_3382_10
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7809..9269
DNA (1461bp) protein (487aa)
BH1805 protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5B271_9CLOT
BH1805 protein {ECO:0000313|EMBL:CCX49665.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
hypothetical protein
L1_008_000M1_scaffold_3382_11
Lachnospiraceae bacterium 6_1_37FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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9368..10708
DNA (1341bp) protein (447aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 6_1_37FAA RepID=E9RXV2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGC73878.1}; TaxID=658656 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_37FAA.;"
putative aminopeptidase
L1_008_000M1_scaffold_3382_12
Firmicutes bacterium CAG:94, Firmicutes, Bacteria

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10774..11514
DNA (741bp) protein (247aa)
Haloacid dehalogenase-like hydrolase n=1 Tax=Firmicutes bacterium CAG:94 RepID=R6YPW4_9FIRM
Haloacid dehalogenase-like hydrolase {ECO:0000313|EMBL:CDD30616.1}; TaxID=1262989 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:94.;"
hydrolase
L1_008_000M1_scaffold_3382_13
Dorea sp. 5-2, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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11929..13095
DNA (1167bp) protein (389aa)
Uncharacterized protein n=1 Tax=Dorea sp. 5-2 RepID=R9NN87_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS81492.1}; TaxID=1235798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea sp. 5-2.;"
bifunctional cystathionine gamma-lyase/maltose regulon repressor
L1_008_000M1_scaffold_3382_14
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13205..13441)
DNA (237bp) protein (79aa)
Uncharacterized protein n=1 Tax=Ruminococcus lactaris CC59_002D RepID=V8C4J9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD22328.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
Protein of unknown function (DUF3343).
L1_008_000M1_scaffold_3382_15
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13438..14568)
DNA (1131bp) protein (377aa)
putative cysteine desulfurase (EC:2.8.1.7)
Cysteine desulfurase family protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5B3B2_9CLOT
Cysteine desulfurase family protein {ECO:0000313|EMBL:CCX50040.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
L1_008_000M1_scaffold_3382_16
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14565..15020)
DNA (456bp) protein (152aa)
Selenium metabolism protein YedF n=1 Tax=Clostridium sp. CAG:226 RepID=R5BF70_9CLOT
Selenium metabolism protein YedF {ECO:0000313|EMBL:CCX50041.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
selenium metabolism protein YedF
L1_008_000M1_scaffold_3382_17
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14995..15195)
DNA (201bp) protein (67aa)
Selenium metabolism protein YedF n=1 Tax=Clostridium sp. CAG:226 RepID=R5BF70_9CLOT
Selenium metabolism protein YedF {ECO:0000313|EMBL:CCX50041.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
selenium metabolism protein YedF
L1_008_000M1_scaffold_3382_18
unknown

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comp(15371..15544)
DNA (174bp) protein (58aa)

This feature has no annotations

Displaying 18 items

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