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L1_008_000M1_scaffold_3428

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_3428_1
[Clostridium] hiranonis, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..301
DNA (300bp) protein (100aa)
Fibronectin-binding protein n=1 Tax=Clostridium hiranonis DSM 13275 RepID=B6FYX3_9FIRM
Fibronectin-binding protein {ECO:0000313|EMBL:EEA85264.1}; TaxID=500633 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] hiranonis DSM 13275.;"
fibronectin-binding protein
L1_008_000M1_scaffold_3428_2
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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392..1378
DNA (987bp) protein (329aa)
Lipoprotein LpqB GerMN domain protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5B4H8_9CLOT
Lipoprotein LpqB GerMN domain protein {ECO:0000313|EMBL:CCX50193.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
lipoprotein LpqB, GerMN domain-containing protein
L1_008_000M1_scaffold_3428_3
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1460..2056
DNA (597bp) protein (199aa)
Non-canonical purine NTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020486}; EC=3.6.1.19 {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020468};; Non-standard purine NTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; Nucleoside-triphosphate diphosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; Nucleoside-triphosphate pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
Non-canonical purine NTP pyrophosphatase n=1 Tax=Clostridium sp. CAG:226 RepID=R5B7G4_9CLOT
putative deoxyribonucleotide triphosphate pyrophosphatase
L1_008_000M1_scaffold_3428_4
Clostridium sp. CAG:138, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2059..2532
DNA (474bp) protein (158aa)
Phosphoesterase {ECO:0000256|RuleBase:RU362039}; EC=3.1.4.- {ECO:0000256|RuleBase:RU362039};; TaxID=1262775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:138.;"
Phosphodiesterase MJ0936 family n=1 Tax=Clostridium sp. CAG:138 RepID=R6AWH5_9CLOT
phosphodiesterase
L1_008_000M1_scaffold_3428_5
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2551..3372)
DNA (822bp) protein (274aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Clostridium sp. CAG:226 RepID=R5B4J9_9CLOT
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:CCX50218.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
ABC transporter
L1_008_000M1_scaffold_3428_6
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3350..4114)
DNA (765bp) protein (255aa)
ABC-type nitrate/sulfonate/bicarbonate transport system ATPase component n=1 Tax=Clostridium sp. CAG:226 RepID=R5BBJ1_9CLOT
ABC-type nitrate/sulfonate/bicarbonate transport system ATPase component {ECO:0000313|EMBL:CCX50217.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
ABC transporter
L1_008_000M1_scaffold_3428_7
unknown

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comp(4095..4340)
DNA (246bp) protein (82aa)

This feature has no annotations

L1_008_000M1_scaffold_3428_8
Clostridium sp. CAG:138, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4488..4679)
DNA (192bp) protein (64aa)
50S ribosomal protein L28 n=1 Tax=Clostridium sp. CAG:138 RepID=R6AM37_9CLOT
50S ribosomal protein L28 {ECO:0000256|HAMAP-Rule:MF_00373}; TaxID=1262775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:138.;"
50S ribosomal protein L28
L1_008_000M1_scaffold_3428_9
unknown

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5188..5331
DNA (144bp) protein (48aa)

This feature has no annotations

L1_008_000M1_scaffold_3428_10
Clostridium sp. CAG:138, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5431..6612)
DNA (1182bp) protein (394aa)
2-amino-3-ketobutyrate coenzyme A ligase {ECO:0000256|HAMAP-Rule:MF_00985}; Short=AKB ligase {ECO:0000256|HAMAP-Rule:MF_00985};; EC=2.3.1.29 {ECO:0000256|HAMAP-Rule:MF_00985};; Glycine acetyltransferase {ECO:0000256|HAMAP-Rule:MF_00985}; TaxID=1262775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:138.;"
2-amino-3-ketobutyrate coenzyme A ligase n=1 Tax=Clostridium sp. CAG:138 RepID=R6AIY2_9CLOT
2-amino-3-ketobutyrate coenzyme A ligase
L1_008_000M1_scaffold_3428_11
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6639..7679)
DNA (1041bp) protein (347aa)
L-threonine 3-dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00627, ECO:0000256|SAAS:SAAS00056053}; EC=1.1.1.103 {ECO:0000256|HAMAP-Rule:MF_00627, ECO:0000256|SAAS:SAAS00056053};; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
L-threonine 3-dehydrogenase n=1 Tax=Clostridium sp. CAG:226 RepID=R5BED8_9CLOT
L-threonine 3-dehydrogenase
L1_008_000M1_scaffold_3428_12
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7848..9020)
DNA (1173bp) protein (391aa)
KWG Leptospira repeat protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5B2H6_9CLOT
KWG Leptospira repeat protein {ECO:0000313|EMBL:CCX49785.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
KWG Leptospira repeat protein
L1_008_000M1_scaffold_3428_13
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9029..9934)
DNA (906bp) protein (302aa)
hypothetical protein n=1 Tax=Paenibacillus sp. OSY-SE RepID=UPI00036BDEA3
Bacterial regulatory helix-turn-helix, lysR family protein {ECO:0000313|EMBL:KIE45257.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
LysR family transcriptional regulator
L1_008_000M1_scaffold_3428_14
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10129..10485
DNA (357bp) protein (119aa)
Alpha/beta hydrolase fold-containing protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5BE26_9CLOT
Alpha/beta hydrolase fold-containing protein {ECO:0000313|EMBL:CCX51102.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
hypothetical protein
Displaying 14 items

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