ggKbase home page

L1_008_000M1_scaffold_3642

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_3642_1
Enterococcus faecium, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

2..385
DNA (384bp) protein (128aa)
Uncharacterized protein n=1 Tax=Enterococcus faecium 10/96A RepID=U7TXI0_ENTFC
Uncharacterized protein {ECO:0000313|EMBL:ERT48176.1}; TaxID=1391465 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecium 10/96A.;"
L1_008_000M1_scaffold_3642_2
Enterococcus faecium, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(463..1680)
DNA (1218bp) protein (406aa)
thermostable carboxypeptidase 2 (EC:3.4.17.-)
Uncharacterized protein n=1 Tax=Enterococcus faecium 10/96A RepID=U7TW84_ENTFC
Uncharacterized protein {ECO:0000313|EMBL:ERT48177.1}; TaxID=1391465 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecium 10/96A.;"
L1_008_000M1_scaffold_3642_3
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1937..2695)
DNA (759bp) protein (253aa)
Transcriptional regulator AraC/XylS family n=1 Tax=Clostridium sp. CAG:226 RepID=R5B5U7_9CLOT
Transcriptional regulator AraC/XylS family {ECO:0000313|EMBL:CCX50653.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
ydeE1; putative HTH-type transcriptional regulator YdeE
L1_008_000M1_scaffold_3642_4
Anaerotruncus sp. G3(2012), Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2851..3849
DNA (999bp) protein (333aa)
Uncharacterized protein n=1 Tax=Anaerotruncus sp. G3(2012) RepID=R9M7Q4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS63892.1}; TaxID=1235835 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus sp. G3(2012).;"
ABC-type metal ion transport system, periplasmic component/surface adhesin
L1_008_000M1_scaffold_3642_5
Anaerotruncus sp. G3(2012), Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3892..4668
DNA (777bp) protein (259aa)
Phosphonate-transporting ATPase (EC:3.6.3.28)
Uncharacterized protein n=1 Tax=Anaerotruncus sp. G3(2012) RepID=R9LZU9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS63891.1}; TaxID=1235835 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus sp. G3(2012).;"
L1_008_000M1_scaffold_3642_6
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4672..5490
DNA (819bp) protein (273aa)
ABC 3 transport family protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0P6F4_9FIRM
ABC 3 transport family protein {ECO:0000313|EMBL:EDS12779.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
ABC-type Mn2+/Zn2+ transport systems, permease components
L1_008_000M1_scaffold_3642_7
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5563..5943
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9XR54_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY98458.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
L1_008_000M1_scaffold_3642_8
Clostridium sp. CAG:169, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6040..6588)
DNA (549bp) protein (183aa)
GCN5-related N-acetyltransferase n=1 Tax=Clostridium sp. CAG:169 RepID=R6BQK9_9CLOT
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:CDA61396.1}; TaxID=1262778 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:169.;"
deaminase/reductase domain-containing protein
L1_008_000M1_scaffold_3642_9
Clostridium sp. CAG:1024, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6624..7340)
DNA (717bp) protein (239aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:1024 RepID=R5AHJ2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX42770.1}; TaxID=1262770 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1024.;"
hypothetical protein
L1_008_000M1_scaffold_3642_10
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7494..8033)
DNA (540bp) protein (180aa)
Electron transport complex RnfABCDGE type G subunit n=1 Tax=Clostridium sp. CAG:226 RepID=R5B9C9_9CLOT
Electron transport complex subunit G {ECO:0000256|HAMAP-Rule:MF_00479}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
RnfABCDGE type electron transport complex subunit G
L1_008_000M1_scaffold_3642_11
BJP_IG2157_Clostridiales_52_13, Dethiosulfatibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8046..8531)
DNA (486bp) protein (162aa)
Heptaprenyl diphosphate synthase component I n=1 Tax=Clostridium sp. CAG:226 RepID=R5B6G1_9CLOT
Predicted membrane protein
Tax=BJP_IG2157_Clostridiales_52_13
L1_008_000M1_scaffold_3642_12
BJP_IG2157_Clostridiales_52_13, Dethiosulfatibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8528..8893)
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NT42_9FIRM
Tax=BJP_IG2157_Clostridiales_52_13
L1_008_000M1_scaffold_3642_13
GWF2_Clostridiales_38_85_curated, Clostridiales, Bacteria

Not on your lists

comp(8971..9894)
DNA (924bp) protein (308aa)
ApbE family lipoprotein id=3419089 bin=GWF2_Clostridiales_38_85 species=Clostridium saccharolyticum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
ApbE family lipoprotein
Tax=GWF2_Clostridiales_38_85_curated
Displaying 13 items

View Taxonomy