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L1_008_000M1_scaffold_3710

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_3710_1
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..588)
DNA (588bp) protein (196aa)
Colicin V production protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5BF77_9CLOT
Colicin V production protein {ECO:0000313|EMBL:CCX50056.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
colicin V production protein
L1_008_000M1_scaffold_3710_2
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(631..1755)
DNA (1125bp) protein (375aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5B3C4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX50055.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
L1_008_000M1_scaffold_3710_3
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1769..2671)
DNA (903bp) protein (301aa)
Diacylglycerol kinase catalytic region n=1 Tax=Clostridium sp. CAG:226 RepID=R5B771_9CLOT
Diacylglycerol kinase catalytic region {ECO:0000313|EMBL:CCX50054.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
diacylglycerol kinase
L1_008_000M1_scaffold_3710_4
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2674..3558)
DNA (885bp) protein (295aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5B466_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX50053.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
hypothetical protein
L1_008_000M1_scaffold_3710_5
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3781..4620
DNA (840bp) protein (280aa)
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028055}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028063};; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
diaminopimelate epimerase (EC:5.1.1.7)
Diaminopimelate epimerase n=1 Tax=Clostridium sp. CAG:226 RepID=R5B3L3_9CLOT
L1_008_000M1_scaffold_3710_6
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4918..5172
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5B470_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX50058.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
hypothetical protein
L1_008_000M1_scaffold_3710_7
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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5176..6117
DNA (942bp) protein (314aa)
Uncharacterized protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NZB5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM98764.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
L1_008_000M1_scaffold_3710_8
unknown

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6256..6411
DNA (156bp) protein (52aa)

This feature has no annotations

L1_008_000M1_scaffold_3710_9
Desulfitobacterium hafniense, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6426..6689)
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Desulfitobacterium hafniense DP7 RepID=G9XMT5_DESHA
Uncharacterized protein {ECO:0000313|EMBL:EHL07115.1}; TaxID=537010 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfitobacterium.;" source="Desulfitobacterium hafniense DP7.;"
hypothetical protein
L1_008_000M1_scaffold_3710_10
[Clostridium] methylpentosum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6817..6999
DNA (183bp) protein (61aa)
Uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0E9A4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEG31934.1}; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] methylpentosum DSM 5476.;"
L1_008_000M1_scaffold_3710_11
Lachnospiraceae bacterium TWA4, Clostridiales, Clostridia, Firmicutes, Bacteria

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7243..7608
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:242 RepID=R6D240_9CLOT
TWA4_scaffold00001, whole genome shotgun sequence {ECO:0000313|EMBL:KIR03515.1}; TaxID=1392836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium TWA4.;"
hypothetical protein
L1_008_000M1_scaffold_3710_12
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7848..8975
DNA (1128bp) protein (376aa)
Alanine racemase {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|RuleBase:RU004247}; EC=5.1.1.1 {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|RuleBase:RU004247};; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
alr; Alanine racemase (EC:5.1.1.1)
Alanine racemase n=1 Tax=Clostridium sp. CAG:226 RepID=R5B778_9CLOT
L1_008_000M1_scaffold_3710_13
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9097..10035
DNA (939bp) protein (313aa)
Alpha/beta hydrolase n=1 Tax=Clostridium sp. CAG:226 RepID=R5B3D2_9CLOT
Alpha/beta hydrolase {ECO:0000313|EMBL:CCX50065.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
hypothetical protein
L1_008_000M1_scaffold_3710_14
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10079..10885
DNA (807bp) protein (269aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5BB52_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX50067.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
amino acid amidase
L1_008_000M1_scaffold_3710_15
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11301..12248)
DNA (948bp) protein (316aa)
ATPase components of various ABC-type transport systems contain duplicated ATPase n=1 Tax=Clostridium sp. CAG:226 RepID=R5B835_9CLOT
ATPase components of various ABC-type transport systems contain duplicated ATPase {ECO:0000313|EMBL:CCX50424.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
ATPase components of various ABC-type transport systems, contain duplicated ATPase
L1_008_000M1_scaffold_3710_16
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12241..13308)
DNA (1068bp) protein (356aa)
ABC-type dipeptide/oligopeptide/nickel transport system ATPase component n=1 Tax=Clostridium sp. CAG:226 RepID=R5B541_9CLOT
ABC-type dipeptide/oligopeptide/nickel transport system ATPase component {ECO:0000313|EMBL:CCX50423.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component
L1_008_000M1_scaffold_3710_17
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13313..14464)
DNA (1152bp) protein (384aa)
ABC-type dipeptide/oligopeptide/nickel transport systems permease components n=1 Tax=Clostridium sp. CAG:226 RepID=R5BC51_9CLOT
ABC-type dipeptide/oligopeptide/nickel transport systems permease components {ECO:0000313|EMBL:CCX50422.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
ABC-type dipeptide/oligopeptide/nickel transport systems, permease components
L1_008_000M1_scaffold_3710_18
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14461..15414)
DNA (954bp) protein (318aa)
ABC-type dipeptide/oligopeptide/nickel transport systems permease components n=1 Tax=Clostridium sp. CAG:226 RepID=R5BG49_9CLOT
ABC-type dipeptide/oligopeptide/nickel transport systems permease components {ECO:0000313|EMBL:CCX50421.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
ABC-type dipeptide/oligopeptide/nickel transport systems, permease components
L1_008_000M1_scaffold_3710_19
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15547..17400)
DNA (1854bp) protein (618aa)
ABC-type oligopeptide transport system periplasmic component n=1 Tax=Clostridium sp. CAG:226 RepID=R5B4C6_9CLOT
ABC-type oligopeptide transport system periplasmic component {ECO:0000313|EMBL:CCX50420.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
ABC-type oligopeptide transport system, periplasmic component
L1_008_000M1_scaffold_3710_20
unknown

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17568..17729
DNA (162bp) protein (54aa)

This feature has no annotations

Displaying 20 items

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