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L1_008_000M1_scaffold_3946

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_3946_1
Firmicutes bacterium CAG:41, Firmicutes, Bacteria

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comp(2..451)
-----------------
DNA (450bp)
protein (150aa)
Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain n=1 Tax=Firmicutes bacterium CAG:41 RepID=R6NCH7_9FIRM
Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain {ECO:0000313|EMBL:CDB95567.1}; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;"
winged helix family two component transcriptional regulator
L1_008_000M1_scaffold_3946_2
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(494..1273)
-----------------
DNA (780bp)
protein (260aa)
Endonuclease MutS2 {ECO:0000256|HAMAP-Rule:MF_00092, ECO:0000256|SAAS:SAAS00084206}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00092, ECO:0000256|SAAS:SAAS00084246};; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
Endonuclease MutS2 n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7ILL5_9FIRM
mutS1; MutS2 protein MutS
L1_008_000M1_scaffold_3946_3
Prevotella sp. CAG:732, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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1287..2972
-----------------
DNA (1686bp)
protein (562aa)
Uncharacterized protein n=1 Tax=Prevotella sp. CAG:732 RepID=R6X283_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDD17578.1}; TaxID=1262934 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:732.;"
L1_008_000M1_scaffold_3946_4
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2845..4113)
-----------------
DNA (1269bp)
protein (423aa)
Diaminopimelate decarboxylase (EC:4.1.1.20)
Diaminopimelate decarboxylase n=1 Tax=Clostridium sp. CAG:226 RepID=R5BFG8_9CLOT
Diaminopimelate decarboxylase {ECO:0000313|EMBL:CCX50186.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
L1_008_000M1_scaffold_3946_5
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

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comp(4133..5518)
-----------------
DNA (1386bp)
protein (462aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5SP12_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ46697.1}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
hypothetical protein
L1_008_000M1_scaffold_3946_6
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5555..6382)
-----------------
DNA (828bp)
protein (276aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5B7F7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX50184.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
peptidase
L1_008_000M1_scaffold_3946_7
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6532..7473)
-----------------
DNA (942bp)
protein (314aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5B475_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX50370.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
ATPase components of various ABC-type transport systems, contain duplicated ATPase
L1_008_000M1_scaffold_3946_8
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7473..8534)
-----------------
DNA (1062bp)
protein (354aa)
ABC transporter ATP-binding protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5BG00_9CLOT
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CCX50371.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
oppD; oligopeptide ABC transporter (ATP-binding protein)
L1_008_000M1_scaffold_3946_9
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8550..10241)
-----------------
DNA (1692bp)
protein (564aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5BBZ3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX50372.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
ABC-type transporter, integral membrane subunit
L1_008_000M1_scaffold_3946_10
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10238..10441)
-----------------
DNA (204bp)
protein (68aa)
ABC transporter permease protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5B4Y5_9CLOT
ABC transporter permease protein {ECO:0000313|EMBL:CCX50373.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
ABC-type dipeptide/oligopeptide/nickel transport systems, permease components
Displaying 10 items

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