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L1_008_000M1_scaffold_1224

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_1224_1
Eubacterium sp. CAG:202, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1..999
DNA (999bp) protein (333aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:202 RepID=R6MWS6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC03285.1}; TaxID=1262884 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:202.;"
L1_008_000M1_scaffold_1224_2
unknown

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992..1585
DNA (594bp) protein (198aa)

This feature has no annotations

L1_008_000M1_scaffold_1224_3
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1570..2445
DNA (876bp) protein (292aa)
Two-component hybrid sensor and regulator n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6I6S4_9FIRM
Two-component hybrid sensor and regulator {ECO:0000313|EMBL:CDB41096.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
Signal transduction histidine kinase-like protein
L1_008_000M1_scaffold_1224_4
Eubacterium sp. CAG:202, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2420..3037
DNA (618bp) protein (206aa)
Two-component response regulator n=1 Tax=Eubacterium sp. CAG:202 RepID=R6P005_9FIRM
Two-component response regulator {ECO:0000313|EMBL:CDC03287.1}; TaxID=1262884 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:202.;"
two component transcriptional regulator, LuxR family
L1_008_000M1_scaffold_1224_5
unknown

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3198..3578
DNA (381bp) protein (127aa)

This feature has no annotations

L1_008_000M1_scaffold_1224_6
Coprococcus comes, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3622..5001
DNA (1380bp) protein (460aa)
Uncharacterized protein n=1 Tax=Coprococcus comes ATCC 27758 RepID=C0BE06_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEG88083.1}; TaxID=470146 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus comes ATCC 27758.;"
carbohydrate ABC transporter substrate-binding protein
L1_008_000M1_scaffold_1224_7
Firmicutes bacterium CAG:56, Firmicutes, Bacteria

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5034..6617
DNA (1584bp) protein (528aa)
Transcriptional regulator LuxR family n=1 Tax=Firmicutes bacterium CAG:56 RepID=R6BF75_9FIRM
Transcriptional regulator LuxR family {ECO:0000313|EMBL:CDA62913.1}; TaxID=1263031 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:56.;"
response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
L1_008_000M1_scaffold_1224_8
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

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6877..7278
DNA (402bp) protein (134aa)
Uncharacterized protein n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8VSQ8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOQ35558.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
L1_008_000M1_scaffold_1224_9
[Eubacterium] cellulosolvens, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7412..9094
DNA (1683bp) protein (561aa)
Uncharacterized protein n=1 Tax=Eubacterium cellulosolvens 6 RepID=I5AXA4_EUBCE
Uncharacterized protein {ECO:0000313|EMBL:EIM58427.1}; Flags: Precursor;; TaxID=633697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] cellulosolvens 6.;"
L1_008_000M1_scaffold_1224_10
unknown

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9176..10483
DNA (1308bp) protein (436aa)

This feature has no annotations

L1_008_000M1_scaffold_1224_11
Catonella morbi, Catonella, Clostridiales, Clostridia, Firmicutes, Bacteria

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10535..11212
DNA (678bp) protein (226aa)
TIGR00266 family protein n=1 Tax=Catonella morbi ATCC 51271 RepID=V2Y4T7_9FIRM
TIGR00266 family protein {ECO:0000313|EMBL:ESL03077.1}; TaxID=592026 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Catonella.;" source="Catonella morbi ATCC 51271.;"
hypothetical protein
L1_008_000M1_scaffold_1224_12
unknown

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11298..12362
DNA (1065bp) protein (355aa)

This feature has no annotations

L1_008_000M1_scaffold_1224_13
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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12585..13586
DNA (1002bp) protein (334aa)
TPR-repeat-containing protein Cell-adhesion domain protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GQ68_9FIRM
TPR-repeat-containing protein Cell-adhesion domain protein {ECO:0000313|EMBL:CDB27558.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
hypothetical protein
L1_008_000M1_scaffold_1224_14
unknown

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13715..14659
DNA (945bp) protein (315aa)

This feature has no annotations

L1_008_000M1_scaffold_1224_15
Clostridium sp. CAG:510, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14656..15144
DNA (489bp) protein (163aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:510 RepID=R6CUY6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA69147.1}; TaxID=1262816 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:510.;"
hypothetical protein
L1_008_000M1_scaffold_1224_16
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15201..15596
DNA (396bp) protein (132aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L9H7_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL16272.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L1_008_000M1_scaffold_1224_17
Oscillibacter valericigenes, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15761..16483
DNA (723bp) protein (241aa)
Uncharacterized protein n=1 Tax=Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 / Sjm18-20) RepID=G4KY53_OSCVS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL01057.1}; TaxID=693746 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 /; Sjm18-20).;"
L1_008_000M1_scaffold_1224_18
unknown

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comp(16580..16852)
DNA (273bp) protein (91aa)

This feature has no annotations

L1_008_000M1_scaffold_1224_19
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16843..17388)
DNA (546bp) protein (182aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5B7N2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX50264.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
hypothetical protein
L1_008_000M1_scaffold_1224_20
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

Not on your lists

comp(17388..18404)
DNA (1017bp) protein (339aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5IZ90_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY42046.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
hypothetical protein
L1_008_000M1_scaffold_1224_21
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18432..19580)
DNA (1149bp) protein (383aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C6K6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO35840.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
Fe3+-hydroxamate ABC transporter periplasmic protein
L1_008_000M1_scaffold_1224_22
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

Not on your lists

comp(19604..20323)
DNA (720bp) protein (240aa)
ABC transporter ATP-binding protein n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6D3P8_9FIRM
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CDA82370.1}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
L1_008_000M1_scaffold_1224_23
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(20316..21110)
DNA (795bp) protein (265aa)
hemin import ATP-binding protein HmuV (EC:3.6.3.-)
ABC transporter, ATP-binding protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NX27_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDM99375.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
L1_008_000M1_scaffold_1224_24
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21107..22213)
DNA (1107bp) protein (369aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C6K3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO35837.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
Fe3+-siderophore ABC transporter permease
L1_008_000M1_scaffold_1224_25
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22382..23077
DNA (696bp) protein (232aa)
Putative selenium-dependent hydroxylase accessory protein YqeC n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PS66_9FIRM
Putative selenium-dependent hydroxylase accessory protein YqeC {ECO:0000313|EMBL:EFB74443.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
probable selenium-dependent hydroxylase accessory protein YqeC
L1_008_000M1_scaffold_1224_26
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23065..23865
DNA (801bp) protein (267aa)
YqeB family selenium-dependent molybdenum hydroxylase system protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4X978_9FIRM
YqeB family selenium-dependent molybdenum hydroxylase system protein {ECO:0000313|EMBL:EGJ48047.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hypothetical protein
L1_008_000M1_scaffold_1224_27
Cellulosilyticum lentocellum, Cellulosilyticum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(24077..24865)
DNA (789bp) protein (263aa)
Zinc/iron permease n=1 Tax=Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) RepID=F2JPM2_CELLD
zinc/iron permease
Zinc/iron permease {ECO:0000313|EMBL:ADZ83682.1}; TaxID=642492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Cellulosilyticum.;" source="Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB; 11756 / RHM5) (Clostridium lentocellum).;"
L1_008_000M1_scaffold_1224_28
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25017..26450)
DNA (1434bp) protein (478aa)
hndC; NADP-reducing hydrogenase subunit HndC (EC:1.12.1.3)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5B7F0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX51228.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
Displaying 28 items

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