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L1_008_000M1_scaffold_1278

Search features with annotation key words

Displaying items 1-30 of 39 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_1278_1
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2..685
DNA (684bp) protein (228aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5BCF8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX50507.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
hypothetical protein
L1_008_000M1_scaffold_1278_2
Clostridium sp. CAG:1024, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

889..1176
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:1024 RepID=R5AID6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX41584.1}; TaxID=1262770 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1024.;"
L1_008_000M1_scaffold_1278_3
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1191..1739
DNA (549bp) protein (183aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5B8F9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX50509.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
L1_008_000M1_scaffold_1278_4
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1745..3169
DNA (1425bp) protein (475aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5B4Q5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX50510.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
L1_008_000M1_scaffold_1278_5
Clostridium sp. CAG:138, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3169..3357
DNA (189bp) protein (63aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:138 RepID=R6AIC3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA50750.1}; TaxID=1262775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:138.;"
L1_008_000M1_scaffold_1278_6
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3374..4282
DNA (909bp) protein (303aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5BCG0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX50512.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
L1_008_000M1_scaffold_1278_7
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4261..5172
DNA (912bp) protein (304aa)
Phage pre-neck appendage-like protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5B5H2_9CLOT
Phage pre-neck appendage-like protein {ECO:0000313|EMBL:CCX50513.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
L1_008_000M1_scaffold_1278_8
unknown

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5490..5843
DNA (354bp) protein (118aa)

This feature has no annotations

L1_008_000M1_scaffold_1278_9
unknown

Not on your lists

5845..6252
DNA (408bp) protein (136aa)

This feature has no annotations

L1_008_000M1_scaffold_1278_10
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6347..7066
DNA (720bp) protein (240aa)
NLP/P60 protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5B8G4_9CLOT
NLP/P60 protein {ECO:0000313|EMBL:CCX50514.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
Hypothetical protein
L1_008_000M1_scaffold_1278_11
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7120..7539
DNA (420bp) protein (140aa)
Toxin secretion/phage lysis holin n=1 Tax=Clostridium sp. CAG:226 RepID=R5B4R0_9CLOT
Toxin secretion/phage lysis holin {ECO:0000313|EMBL:CCX50515.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
putative 14.9 kDa protein in nagH 3'region
L1_008_000M1_scaffold_1278_12
Clostridium sp. CAG:1024, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7606..8541
DNA (936bp) protein (312aa)
Putative DNA replication protein DnaC n=1 Tax=Clostridium sp. CAG:1024 RepID=R5APT1_9CLOT
Putative DNA replication protein DnaC {ECO:0000313|EMBL:CCX41206.1}; TaxID=1262770 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1024.;"
DNA replication protein DnaC
L1_008_000M1_scaffold_1278_13
unknown

Not on your lists

comp(8460..8750)
DNA (291bp) protein (97aa)

This feature has no annotations

L1_008_000M1_scaffold_1278_14
Brachyspira sp. CAG:700, Brachyspira, Brachyspirales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(8734..9384)
DNA (651bp) protein (217aa)
Uncharacterized protein n=1 Tax=Brachyspira sp. CAG:700 RepID=R5L8V2_9SPIR
Uncharacterized protein {ECO:0000313|EMBL:CCY75513.1}; TaxID=1262760 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:700.;"
arsenate reductase
L1_008_000M1_scaffold_1278_15
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9585..10778)
DNA (1194bp) protein (398aa)
DnaD-like protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5BCV6_9CLOT
DnaD-like protein {ECO:0000313|EMBL:CCX49261.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
dnaD; DNA replication protein dnaD
L1_008_000M1_scaffold_1278_16
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10967..12463
DNA (1497bp) protein (499aa)
Aminopeptidase N n=1 Tax=Clostridium sp. CAG:226 RepID=R5B8U2_9CLOT
Aminopeptidase N {ECO:0000313|EMBL:CCX49287.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
PepN; aminopeptidase
L1_008_000M1_scaffold_1278_17
Firmicutes bacterium CAG:534, Firmicutes, Bacteria

Not on your lists

12597..13484
DNA (888bp) protein (296aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:534 RepID=R6ZR70_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD48570.1}; TaxID=1263027 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:534.;"
hypothetical protein
L1_008_000M1_scaffold_1278_18
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13772..14332)
DNA (561bp) protein (187aa)
Putative manganese efflux pump MntP n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NVX6_9FIRM
Putative manganese efflux pump MntP {ECO:0000256|HAMAP-Rule:MF_01521}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
Predicted membrane protein
L1_008_000M1_scaffold_1278_19
unknown

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comp(14533..14985)
DNA (453bp) protein (151aa)

This feature has no annotations

L1_008_000M1_scaffold_1278_20
unknown

Not on your lists

comp(15041..15487)
DNA (447bp) protein (149aa)

This feature has no annotations

L1_008_000M1_scaffold_1278_21
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15513..16943)
DNA (1431bp) protein (477aa)
Putative membrane protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5B5Y8_9CLOT
Putative membrane protein {ECO:0000313|EMBL:CCX50698.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
hypothetical protein
L1_008_000M1_scaffold_1278_22
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16943..17167)
DNA (225bp) protein (75aa)
Predicted transcriptional regulator n=1 Tax=Clostridium sp. CAG:226 RepID=R5BCW6_9CLOT
transcriptional regulator
Predicted transcriptional regulator {ECO:0000313|EMBL:CCX50697.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
L1_008_000M1_scaffold_1278_23
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17181..17636)
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5BGV6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX50696.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
hypothetical protein
L1_008_000M1_scaffold_1278_24
unknown

Not on your lists

comp(17776..18093)
DNA (318bp) protein (106aa)

This feature has no annotations

L1_008_000M1_scaffold_1278_25
Clostridiales bacterium oral taxon 876, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18213..19574)
DNA (1362bp) protein (454aa)
MATE efflux family protein n=1 Tax=Clostridiales bacterium oral taxon 876 str. F0540 RepID=U2EBY9_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:ERI92002.1}; TaxID=1321778 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium oral taxon 876 str. F0540.;"
MATE efflux family protein
L1_008_000M1_scaffold_1278_26
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19726..20418
DNA (693bp) protein (231aa)
Predicted Zn-dependent protease n=1 Tax=Clostridium sp. CAG:226 RepID=R5B554_9CLOT
Predicted Zn-dependent protease {ECO:0000313|EMBL:CCX50695.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
putative Zn-dependent protease
L1_008_000M1_scaffold_1278_27
Clostridium sp. CAG:1024, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21013..22077
DNA (1065bp) protein (355aa)
ABC transport system substrate-binding protein n=1 Tax=Clostridium sp. CAG:1024 RepID=R5AGB6_9CLOT
ABC transport system substrate-binding protein {ECO:0000313|EMBL:CCX41828.1}; TaxID=1262770 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1024.;"
ABC transporter substrate-binding protein
L1_008_000M1_scaffold_1278_28
Clostridium sp. CAG:1024, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22168..23052
DNA (885bp) protein (295aa)
ABC transport system permease protein n=1 Tax=Clostridium sp. CAG:1024 RepID=R5AM09_9CLOT
ABC transport system permease protein {ECO:0000313|EMBL:CCX41827.1}; TaxID=1262770 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1024.;"
ABC transporter permease
L1_008_000M1_scaffold_1278_29
Clostridium sp. CAG:1024, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23057..23851
DNA (795bp) protein (265aa)
ABC transporter ATP-binding protein n=1 Tax=Clostridium sp. CAG:1024 RepID=R5ARJ9_9CLOT
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CCX41826.1}; TaxID=1262770 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1024.;"
ABC transporter ATP-binding protein
L1_008_000M1_scaffold_1278_30
Catonella morbi, Catonella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24129..24815)
DNA (687bp) protein (229aa)
HAD hydrolase family n=1 Tax=Catonella morbi ATCC 51271 RepID=V2Z3I7_9FIRM
HAD hydrolase family {ECO:0000313|EMBL:ESL01505.1}; TaxID=592026 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Catonella.;" source="Catonella morbi ATCC 51271.;"
HAD-superfamily hydrolase
Displaying items 1-30 of 39 in total

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