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L1_008_000M1_scaffold_1438

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_1438_1
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(356..925)
DNA (570bp) protein (190aa)
Signal peptidase I {ECO:0000256|RuleBase:RU362042}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042};; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
lepB; signal peptidase I (EC:3.4.21.89)
Signal peptidase I n=1 Tax=Clostridium sp. CAG:226 RepID=R5B5X9_9CLOT
L1_008_000M1_scaffold_1438_2
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(952..1542)
DNA (591bp) protein (197aa)
Signal peptidase I {ECO:0000256|RuleBase:RU003993}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU003993};; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
Signal peptidase I n=1 Tax=Clostridium sp. CAG:226 RepID=R5B8W4_9CLOT
hypothetical protein
L1_008_000M1_scaffold_1438_3
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1526..1741)
DNA (216bp) protein (72aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5B548_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX50690.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
hypothetical protein
L1_008_000M1_scaffold_1438_4
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1738..2607)
DNA (870bp) protein (290aa)
MscS Mechanosensitive ion channel n=1 Tax=Clostridium sp. CAG:226 RepID=R5BGV1_9CLOT
MscS Mechanosensitive ion channel {ECO:0000313|EMBL:CCX50691.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
mechanosensitive ion channel MscS
L1_008_000M1_scaffold_1438_5
Clostridium sp. CAG:1024, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3020..4372
DNA (1353bp) protein (451aa)
Amino acid transporter n=1 Tax=Clostridium sp. CAG:1024 RepID=R5AFJ4_9CLOT
Amino acid transporter {ECO:0000313|EMBL:CCX42030.1}; TaxID=1262770 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1024.;"
hypothetical protein
L1_008_000M1_scaffold_1438_6
unknown

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comp(4369..4653)
DNA (285bp) protein (95aa)

This feature has no annotations

L1_008_000M1_scaffold_1438_7
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

4697..5155
DNA (459bp) protein (153aa)
5-nitroimidazole antibiotic resistance protein n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6EYC7_9FIRM
5-nitroimidazole antibiotic resistance protein {ECO:0000313|EMBL:CDB02119.1}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
putative nitroimidazole resistance protein
L1_008_000M1_scaffold_1438_8
unknown

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5172..5450
DNA (279bp) protein (93aa)

This feature has no annotations

L1_008_000M1_scaffold_1438_9
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5554..7089
DNA (1536bp) protein (512aa)
Cell envelope-related transcriptional attenuator n=1 Tax=Clostridium sp. CAG:226 RepID=R5BCW1_9CLOT
Cell envelope-related transcriptional attenuator {ECO:0000313|EMBL:CCX50692.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
cell envelope-related transcriptional attenuator
L1_008_000M1_scaffold_1438_10
BJP_IG2157_Clostridiales_52_13, Dethiosulfatibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7125..8300
DNA (1176bp) protein (392aa)
N-acyl-L-amino acid amidohydrolase n=1 Tax=Brevibacillus brevis RepID=UPI000348CE76
peptidase M20D family protein
Tax=BJP_IG2157_Clostridiales_52_13
L1_008_000M1_scaffold_1438_11
BJP_IG2157_Clostridiales_52_13, Dethiosulfatibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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8317..9126
DNA (810bp) protein (270aa)
Metallo-beta-lactamase family protein n=1 Tax=Clostridium sp. CAG:505 RepID=R7B7F6_9CLOT
metallo-hydrolase/oxidoreductase
Tax=BJP_IG2157_Clostridiales_52_13
L1_008_000M1_scaffold_1438_12
Parvimonas micra, Parvimonas, Clostridiales, Clostridia, Firmicutes, Bacteria

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9237..9761
DNA (525bp) protein (175aa)
Acetyltransferase, GNAT family n=1 Tax=Parvimonas micra ATCC 33270 RepID=A8SLC4_9FIRM
Acetyltransferase, GNAT family {ECO:0000313|EMBL:EDP24356.1}; TaxID=411465 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Parvimonas.;" source="Parvimonas micra ATCC 33270.;"
N-acetyltransferase GCN5
L1_008_000M1_scaffold_1438_13
Clostridium sp. CAG:1024, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9899..10384)
DNA (486bp) protein (162aa)
Protein of hypothetical function DUF988 n=1 Tax=Clostridium sp. CAG:1024 RepID=R5AG03_9CLOT
Protein of hypothetical function DUF988 {ECO:0000313|EMBL:CCX42215.1}; TaxID=1262770 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1024.;"
hypothetical protein
L1_008_000M1_scaffold_1438_14
Clostridium sp. CAG:138, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10392..10589)
DNA (198bp) protein (66aa)
Hydrid cluster protein-associated redox disulfide domain protein n=1 Tax=Clostridium sp. CAG:138 RepID=R6AWX1_9CLOT
Hydrid cluster protein-associated redox disulfide domain protein {ECO:0000313|EMBL:CDA53324.1}; TaxID=1262775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:138.;"
redox disulfide domain-containing protein
L1_008_000M1_scaffold_1438_15
Clostridium sp. CAG:138, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10689..12638)
DNA (1950bp) protein (650aa)
Pullulanase (EC:3.2.1.41)
Alpha amylase catalytic region n=1 Tax=Clostridium sp. CAG:138 RepID=R6AWY5_9CLOT
Alpha amylase catalytic region {ECO:0000313|EMBL:CDA53339.1}; TaxID=1262775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:138.;"
L1_008_000M1_scaffold_1438_16
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12669..14138)
DNA (1470bp) protein (490aa)
Glycogen synthase {ECO:0000256|HAMAP-Rule:MF_00484}; EC=2.4.1.21 {ECO:0000256|HAMAP-Rule:MF_00484};; Starch [bacterial glycogen] synthase {ECO:0000256|HAMAP-Rule:MF_00484}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
Glycogen synthase n=1 Tax=Clostridium sp. CAG:226 RepID=R5BBG8_9CLOT
glycogen synthase
L1_008_000M1_scaffold_1438_17
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14213..15337)
DNA (1125bp) protein (375aa)
Glucose-1-phosphate adenylyltransferase GlgD subunit n=1 Tax=Clostridium sp. CAG:226 RepID=R5BFH2_9CLOT
Glucose-1-phosphate adenylyltransferase GlgD subunit {ECO:0000313|EMBL:CCX50191.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
glucose-1-phosphate adenylyltransferase, GlgD subunit
L1_008_000M1_scaffold_1438_18
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15342..16571)
DNA (1230bp) protein (410aa)
Glucose-1-phosphate adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00624, ECO:0000256|RuleBase:RU003565}; EC=2.7.7.27 {ECO:0000256|HAMAP-Rule:MF_00624, ECO:0000256|RuleBase:RU003565};; ADP-glucose pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00624}; ADP-glucose synthase {ECO:0000256|HAMAP-Rule:MF_00624}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
glucose-1-phosphate adenylyltransferase (EC:2.7.7.27)
Glucose-1-phosphate adenylyltransferase n=1 Tax=Clostridium sp. CAG:226 RepID=R5B3N3_9CLOT
L1_008_000M1_scaffold_1438_19
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16601..18457)
DNA (1857bp) protein (619aa)
1,4-alpha-glucan branching enzyme {ECO:0000256|SAAS:SAAS00046836}; EC=2.4.1.18 {ECO:0000256|SAAS:SAAS00046836};; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
1 4-alpha-glucan branching enzyme GlgB n=1 Tax=Clostridium sp. CAG:226 RepID=R5BAR9_9CLOT
glgB; 1,4-alpha-glucan-branching protein
L1_008_000M1_scaffold_1438_20

Not on your lists

18642..19610
DNA (969bp) protein (323aa)
Lipoate--protein ligase {ECO:0000256|SAAS:SAAS00026637}; EC=2.7.7.63 {ECO:0000256|SAAS:SAAS00026637};; TaxID=1393673 species="Bacteria; environmental samples.;" source="uncultured bacterium Contigcl_47.;"
lipoate-protein ligase (EC:6.-.-.-)
Lipoate-protein ligase n=1 Tax=Desulfitobacterium dichloroeliminans (strain LMG P-21439 / DCA1) RepID=L0F903_DESDL
L1_008_000M1_scaffold_1438_21
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19614..20282)
DNA (669bp) protein (223aa)
Uncharacterized protein n=1 Tax=Clostridium leptum CAG:27 RepID=R6P4G1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC04852.1}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
membrane-spanning protein
L1_008_000M1_scaffold_1438_22
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(20443..21330)
DNA (888bp) protein (296aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5BID0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX51206.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
conserved hypothetical protein
L1_008_000M1_scaffold_1438_23
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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21602..23263
DNA (1662bp) protein (554aa)
NLP/P60 protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5BED0_9CLOT
NLP/P60 protein {ECO:0000313|EMBL:CCX51207.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
putative peptidoglycan-binding domain-containing protein
L1_008_000M1_scaffold_1438_24
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23383..23556
DNA (174bp) protein (58aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5B4N9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX50268.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
L1_008_000M1_scaffold_1438_25
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23622..24152)
DNA (531bp) protein (177aa)
Inorganic pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_00209}; EC=3.6.1.1 {ECO:0000256|HAMAP-Rule:MF_00209};; Pyrophosphate phospho-hydrolase {ECO:0000256|HAMAP-Rule:MF_00209}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
Inorganic pyrophosphatase (EC:3.6.1.1)
Inorganic pyrophosphatase n=1 Tax=Clostridium sp. CAG:352 RepID=R6R3R1_9CLOT
L1_008_000M1_scaffold_1438_26
Clostridium sp. CAG:590, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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24375..24854
DNA (480bp) protein (160aa)
TspO/MBR family protein n=1 Tax=Clostridium sp. CAG:590 RepID=R5DYT0_9CLOT
TspO/MBR family protein {ECO:0000313|EMBL:CCX85363.1}; TaxID=1262825 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:590.;"
hypothetical protein
L1_008_000M1_scaffold_1438_27
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24851..25540)
DNA (690bp) protein (230aa)
Methyltransferase YaeB family n=1 Tax=Clostridium sp. CAG:226 RepID=R5BGX5_9CLOT
Methyltransferase YaeB family {ECO:0000313|EMBL:CCX50716.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
methyltransferase, YaeB/AF_0241 family
L1_008_000M1_scaffold_1438_28
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26084..26572)
DNA (489bp) protein (163aa)
GNAT family acetyltransferase YjcF n=1 Tax=Clostridium sp. CAG:226 RepID=R5B5N7_9CLOT
N-acetyltransferase
Thioesterase superfamily protein {ECO:0000313|EMBL:ABM41904.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
L1_008_000M1_scaffold_1438_29
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26585..27907)
DNA (1323bp) protein (441aa)
Putative permease n=1 Tax=Clostridium sp. CAG:226 RepID=R5BG98_9CLOT
Putative permease {ECO:0000313|EMBL:CCX50461.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
permease
L1_008_000M1_scaffold_1438_30
Clostridium sp. CAG:1024, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27894..28562)
DNA (669bp) protein (223aa)
Uridine kinase {ECO:0000256|RuleBase:RU003825}; EC=2.7.1.48 {ECO:0000256|RuleBase:RU003825};; TaxID=1262770 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1024.;"
udk; uridine kinase (EC:2.7.1.48)
Uridine kinase n=1 Tax=Clostridium sp. CAG:1024 RepID=R5AJB2_9CLOT
Displaying items 1-30 of 32 in total

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