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L1_008_000M1_scaffold_1944

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_1944_1
GWF2_Lentisphaerae_49_21_curated, Lentisphaerae, Bacteria

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comp(91..945)
DNA (855bp) protein (285aa)
Putative uncharacterized protein id=3363444 bin=GWF2_Lentisphaerae_49_21 species=Clostridium perfringens genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Lentisphaerae_49_21 organism_group=Lentisphaerae organism_desc=Very large genome: good +
hypothetical protein
Tax=GWF2_Lentisphaerae_49_21_curated
L1_008_000M1_scaffold_1944_2
Odoribacter sp. CAG:788, Odoribacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(970..1773)
DNA (804bp) protein (268aa)
Uncharacterized protein n=1 Tax=Odoribacter sp. CAG:788 RepID=R5P8M3_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CCZ10604.1}; TaxID=1262909 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Odoribacter; environmental samples.;" source="Odoribacter sp. CAG:788.;"
hypothetical protein
L1_008_000M1_scaffold_1944_3
Clostridium sp. CAG:1024, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1784..1996)
DNA (213bp) protein (71aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:1024 RepID=R5AHC8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX42695.1}; TaxID=1262770 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1024.;"
L1_008_000M1_scaffold_1944_4
Clostridium sp. CAG:1024, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1993..2997)
DNA (1005bp) protein (335aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:1024 RepID=R5AU28_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX42696.1}; TaxID=1262770 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1024.;"
hypothetical protein
L1_008_000M1_scaffold_1944_5
Clostridium sp. CAG:1024, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3005..4030)
DNA (1026bp) protein (342aa)
Glycosyltransferase group 2 family protein n=1 Tax=Clostridium sp. CAG:1024 RepID=R5APM9_9CLOT
Glycosyltransferase group 2 family protein {ECO:0000313|EMBL:CCX42697.1}; TaxID=1262770 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1024.;"
Glycosyltransferase Family 2 protein
L1_008_000M1_scaffold_1944_6
Clostridium sp. CAG:1013, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4281..5384
DNA (1104bp) protein (368aa)
Aldo/keto reductase n=1 Tax=Clostridium sp. CAG:1013 RepID=R5ABI0_9CLOT
Aldo/keto reductase {ECO:0000313|EMBL:CCX38422.1}; TaxID=1262769 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1013.;"
ydjG; Fe-S oxidoreductase
L1_008_000M1_scaffold_1944_7
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5677..6219
DNA (543bp) protein (181aa)
Signal transduction histidine kinase LytS n=1 Tax=Clostridium sp. CAG:226 RepID=R5B1B2_9CLOT
Signal transduction histidine kinase LytS {ECO:0000313|EMBL:CCX49340.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
hypothetical protein
L1_008_000M1_scaffold_1944_8
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6227..7123
DNA (897bp) protein (299aa)
Alpha-L-glutamate ligase RimK family n=1 Tax=Clostridium sp. CAG:226 RepID=R5B6F4_9CLOT
Alpha-L-glutamate ligase RimK family {ECO:0000313|EMBL:CCX49799.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
alpha-L-glutamate ligase
L1_008_000M1_scaffold_1944_9
Eubacterium siraeum CAG:80, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7156..7989
DNA (834bp) protein (278aa)
Nucleotide-binding protein n=3 Tax=root RepID=B0MK04_9FIRM
Nucleotide-binding protein {ECO:0000313|EMBL:CDC47955.1}; TaxID=1263080 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium siraeum CAG:80.;"
nucleotide-binding protein
L1_008_000M1_scaffold_1944_10
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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8186..8500
DNA (315bp) protein (105aa)
Uncharacterized protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NQC7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDN01732.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
hypothetical protein
L1_008_000M1_scaffold_1944_11
unknown

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8503..8766
DNA (264bp) protein (88aa)

This feature has no annotations

L1_008_000M1_scaffold_1944_12
BJP_IG2157_Clostridiales_52_13, Dethiosulfatibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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8771..9682
DNA (912bp) protein (304aa)
ATP synthase subunit a n=1 Tax=Firmicutes bacterium CAG:272 RepID=R6TRM1_9FIRM
ATP synthase F0 subunit A
Tax=BJP_IG2157_Clostridiales_52_13
L1_008_000M1_scaffold_1944_13
Firmicutes bacterium CAG:272, Firmicutes, Bacteria

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9702..9920
DNA (219bp) protein (73aa)
ATP synthase F0 C subunit n=1 Tax=Firmicutes bacterium CAG:272 RepID=R6UVU8_9FIRM
ATP synthase subunit c {ECO:0000256|SAAS:SAAS00242779}; TaxID=1263015 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:272.;"
ATP synthase F0 subunit C
L1_008_000M1_scaffold_1944_14
Carboxydothermus hydrogenoformans, Carboxydothermus, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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9960..10448
DNA (489bp) protein (163aa)
atpF; ATP synthase F0 subunit B (EC:3.6.3.14)
ATP synthase subunit b n=1 Tax=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) RepID=ATPF_CARHZ
ATP synthase subunit b {ECO:0000255|HAMAP-Rule:MF_01398}; ATP synthase F(0) sector subunit b {ECO:0000255|HAMAP-Rule:MF_01398}; ATPase subunit I {ECO:0000255|HAMAP-Rule:MF_01398}; F-type ATPase subunit b {ECO:0000255|HAMAP-Rule:MF_01398}; Short=F-ATPase subunit b {ECO:0000255|HAMAP-Rule:MF_01398};; TaxID=246194 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Carboxydothermus.;" source="Carboxydothermus hydrogenoformans (strain ATCC BAA-161 / DSM 6008 /; Z-2901).;"
L1_008_000M1_scaffold_1944_15
unknown

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10445..10720
DNA (276bp) protein (92aa)

This feature has no annotations

L1_008_000M1_scaffold_1944_16
Mahella australiensis, Mahella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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10717..12237
DNA (1521bp) protein (507aa)
ATP synthase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01346};; ATP synthase F1 sector subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; F-ATPase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; Flags: Precursor;; TaxID=697281 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family IV. Incertae Sedis; Mahella.;" source="Mahella australiensis (strain DSM 15567 / CIP 107919 / 50-1 BON).;"
ATP synthase subunit alpha n=1 Tax=Mahella australiensis (strain DSM 15567 / CIP 107919 / 50-1 BON) RepID=F3ZY80_MAHA5
ATP synthase F1 subunit alpha
L1_008_000M1_scaffold_1944_17
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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12227..13024
DNA (798bp) protein (266aa)
ATP synthase F1 subcomplex gamma subunit (EC:3.6.3.14)
ATP synthase gamma chain n=2 Tax=Faecalibacterium prausnitzii RepID=D4K5A4_9FIRM
ATP synthase gamma chain {ECO:0000256|HAMAP-Rule:MF_00815}; ATP synthase F1 sector gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; F-ATPase gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L1_008_000M1_scaffold_1944_18
Ruminococcus sp. CAG:254, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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13029..14402
DNA (1374bp) protein (458aa)
ATP synthase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01347};; ATP synthase F1 sector subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; F-ATPase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; TaxID=1262953 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:254.;"
ATP synthase subunit beta n=1 Tax=Ruminococcus sp. CAG:254 RepID=R5V1H8_9FIRM
ATP synthase, F1 beta subunit
L1_008_000M1_scaffold_1944_19
Eubacterium sp. CAG:115, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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14399..14671
DNA (273bp) protein (91aa)
ATP synthase, F1 epsilon subunit (delta in mitochondria) (EC:3.6.3.14)
ATP synthase epsilon chain n=1 Tax=Eubacterium sp. CAG:115 RepID=R5LN56_9FIRM
ATP synthase epsilon chain {ECO:0000256|HAMAP-Rule:MF_00530}; ATP synthase F1 sector epsilon subunit {ECO:0000256|HAMAP-Rule:MF_00530}; F-ATPase epsilon subunit {ECO:0000256|HAMAP-Rule:MF_00530}; TaxID=1262878 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:115.;"
L1_008_000M1_scaffold_1944_20
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14918..16048)
DNA (1131bp) protein (377aa)
Alanine racemase {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|RuleBase:RU004247}; EC=5.1.1.1 {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|RuleBase:RU004247};; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
alanine racemase (EC:5.1.1.1)
Alanine racemase n=1 Tax=Clostridium sp. CAG:226 RepID=R5B5J0_9CLOT
L1_008_000M1_scaffold_1944_21
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16045..17235)
DNA (1191bp) protein (397aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5B990_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX50834.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
AbgB; metal-dependent amidase/aminoacylase/carboxypeptidase
L1_008_000M1_scaffold_1944_22
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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17383..17766
DNA (384bp) protein (128aa)
Putative metal-dependent hydrolase n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6U433_9CLOT
Putative metal-dependent hydrolase {ECO:0000313|EMBL:EKQ56106.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
hypothetical protein
Displaying 22 items

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