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L1_008_000M1_scaffold_2070

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_2070_1
BJP_IG2157_Clostridiales_52_13, Dethiosulfatibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..1225
DNA (1224bp) protein (408aa)
Serine protease, subtilase family n=1 Tax=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) RepID=B5E888_GEOBB
serine protease, subtilase family
Tax=BJP_IG2157_Clostridiales_52_13
L1_008_000M1_scaffold_2070_2
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1321..1686
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5B8B3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX50494.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
hypothetical protein
L1_008_000M1_scaffold_2070_3
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1737..2081)
DNA (345bp) protein (115aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 5_1_57FAA RepID=F7KTI8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN37129.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
spo0A; stage 0 sporulation protein A
L1_008_000M1_scaffold_2070_4
Salinisphaera shabanensis, Salinisphaera, Salinisphaerales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2078..2407)
DNA (330bp) protein (110aa)
Shikimate kinase protein {ECO:0000313|EMBL:ERJ19680.1}; EC=2.7.1.71 {ECO:0000313|EMBL:ERJ19680.1};; TaxID=1033802 species="Bacteria; Proteobacteria; Gammaproteobacteria; Salinisphaerales; Salinisphaeraceae; Salinisphaera.;" source="Salinisphaera shabanensis E1L3A.;"
Shikimate kinase protein n=1 Tax=Salinisphaera shabanensis E1L3A RepID=U2EPE4_9GAMM
L1_008_000M1_scaffold_2070_5
unknown

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2478..2603
DNA (126bp) protein (42aa)

This feature has no annotations

L1_008_000M1_scaffold_2070_6
Clostridium tyrobutyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2869..3618
DNA (750bp) protein (250aa)
Site-specific DNA-methyltransferase (adenine-specific) {ECO:0000256|RuleBase:RU361257}; EC=2.1.1.72 {ECO:0000256|RuleBase:RU361257};; TaxID=1408889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium tyrobutyricum DIVETGP.;"
DNA methyltransferase n=1 Tax=Clostridium tyrobutyricum RepID=UPI00030BBB8A
hypothetical protein
L1_008_000M1_scaffold_2070_7
Clostridium sp. CAG:138, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4274..5017)
DNA (744bp) protein (248aa)
Histidinol phosphatase and related hydrolases of the PHP family n=1 Tax=Clostridium sp. CAG:138 RepID=R6BE49_9CLOT
Histidinol phosphatase and related hydrolases of the PHP family {ECO:0000313|EMBL:CDA51662.1}; TaxID=1262775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:138.;"
His2; PHP family histidinol phosphatase/hydrolase
L1_008_000M1_scaffold_2070_8
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5014..5829)
DNA (816bp) protein (272aa)
Transcriptional regulator RpiR family n=1 Tax=Clostridium sp. CAG:226 RepID=R5B517_9CLOT
Transcriptional regulator RpiR family {ECO:0000313|EMBL:CCX49309.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
transcriptional regulator
L1_008_000M1_scaffold_2070_9
unknown

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6023..6169
DNA (147bp) protein (49aa)

This feature has no annotations

L1_008_000M1_scaffold_2070_10
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6282..9827
DNA (3546bp) protein (1182aa)
Pyruvate-flavodoxin oxidoreductase {ECO:0000256|PIRNR:PIRNR000159}; EC=1.2.7.- {ECO:0000256|PIRNR:PIRNR000159};; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
Pyruvate-flavodoxin oxidoreductase n=1 Tax=Clostridium sp. CAG:226 RepID=R5B207_9CLOT
pyruvate:ferredoxin (flavodoxin) oxidoreductase
L1_008_000M1_scaffold_2070_11

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comp(11068..11730)
DNA (663bp) protein (221aa)
Transglutaminase-like enzyme, putative cysteine protease (Fragment) n=1 Tax=human gut metagenome RepID=K1SD57_9ZZZZ
Transglutaminase-like enzyme, putative cysteine protease {ECO:0000313|EMBL:EKC45326.1}; Flags: Fragment;; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
putative Transglutaminase-like enzyme, cysteine protease
L1_008_000M1_scaffold_2070_12
Clostridium sp. CAG:138, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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12136..13218
DNA (1083bp) protein (361aa)
Aminomethyltransferase {ECO:0000256|HAMAP-Rule:MF_00259, ECO:0000256|RuleBase:RU003981}; EC=2.1.2.10 {ECO:0000256|HAMAP-Rule:MF_00259, ECO:0000256|RuleBase:RU003981};; Glycine cleavage system T protein {ECO:0000256|HAMAP-Rule:MF_00259}; TaxID=1262775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:138.;"
gcvT; glycine cleavage system T protein (EC:2.1.2.10)
Aminomethyltransferase n=1 Tax=Clostridium sp. CAG:138 RepID=R6BCF3_9CLOT
L1_008_000M1_scaffold_2070_13
CG_Mariprof_02, Zetaproteobacteria, Proteobacteria, Bacteria

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13267..13644
DNA (378bp) protein (126aa)
glycine cleavage system protein H n=1 Tax=Mariprofundus ferrooxydans RepID=UPI00037C6AEF
gcvH; glycine cleavage system H protein
Tax=CG_Mariprof_02
L1_008_000M1_scaffold_2070_14
Clostridium sp. CAG:138, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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13752..15095
DNA (1344bp) protein (448aa)
Probable glycine dehydrogenase (decarboxylating) subunit 1 {ECO:0000256|HAMAP-Rule:MF_00712, ECO:0000256|SAAS:SAAS00015358}; EC=1.4.4.2 {ECO:0000256|HAMAP-Rule:MF_00712, ECO:0000256|SAAS:SAAS00022796};; Glycine cleavage system P-protein subunit 1 {ECO:0000256|HAMAP-Rule:MF_00712}; Glycine decarboxylase subunit 1 {ECO:0000256|HAMAP-Rule:MF_00712}; Glycine dehydrogenase (aminomethyl-transferring) subunit 1 {ECO:0000256|HAMAP-Rule:MF_00712}; TaxID=1262775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:138.;"
gcvPA; glycine cleavage system P protein subunit 1 (EC:1.4.4.2)
Probable glycine dehydrogenase [decarboxylating] subunit 1 n=1 Tax=Clostridium sp. CAG:138 RepID=R6AQQ7_9CLOT
L1_008_000M1_scaffold_2070_15
Clostridium sp. CAG:138, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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15095..16549
DNA (1455bp) protein (485aa)
Probable glycine dehydrogenase (decarboxylating) subunit 2 {ECO:0000256|HAMAP-Rule:MF_00713}; EC=1.4.4.2 {ECO:0000256|HAMAP-Rule:MF_00713};; Glycine cleavage system P-protein subunit 2 {ECO:0000256|HAMAP-Rule:MF_00713}; Glycine decarboxylase subunit 2 {ECO:0000256|HAMAP-Rule:MF_00713}; Glycine dehydrogenase (aminomethyl-transferring) subunit 2 {ECO:0000256|HAMAP-Rule:MF_00713}; TaxID=1262775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:138.;"
glycine dehydrogenase (EC:1.4.4.2)
Probable glycine dehydrogenase (decarboxylating) subunit 2 n=1 Tax=Clostridium sp. CAG:138 RepID=R6AJ84_9CLOT
L1_008_000M1_scaffold_2070_16
unknown

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16670..16867
DNA (198bp) protein (66aa)

This feature has no annotations

L1_008_000M1_scaffold_2070_17
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(17238..17843)
DNA (606bp) protein (202aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5B6Z9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX51018.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
Displaying 17 items

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