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L1_008_000M1_scaffold_2861

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_2861_1
unknown

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comp(234..443)
DNA (210bp) protein (70aa)

This feature has no annotations

L1_008_000M1_scaffold_2861_2
unknown

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comp(504..728)
DNA (225bp) protein (75aa)

This feature has no annotations

L1_008_000M1_scaffold_2861_3
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

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881..1231
DNA (351bp) protein (117aa)
Uncharacterized protein n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8VTH7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOQ35784.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
XRE family transcriptional regulator
L1_008_000M1_scaffold_2861_4
Oscillibacter sp. CAG:155, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1324..1758)
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:155 RepID=R6U2A9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC74231.1}; TaxID=1262910 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:155.;"
MATE efflux family protein
L1_008_000M1_scaffold_2861_5
Neorhizobium galegae, Neorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1876..2934)
DNA (1059bp) protein (353aa)
D-serine dehydratase protein n=1 Tax=Salinisphaera shabanensis E1L3A RepID=U2EN51_9GAMM
Metal-activated pyridoxal enzyme
Metal-activated pyridoxal enzyme {ECO:0000313|EMBL:CDN49548.1}; TaxID=399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Neorhizobium.;" source="Rhizobium galegae.;"
L1_008_000M1_scaffold_2861_6
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3059..4240)
DNA (1182bp) protein (394aa)
GntR family transcriptional regulator n=8 Tax=Clostridium clostridioforme RepID=N9WJ12_9CLOT
GntR family transcriptional regulator {ECO:0000313|EMBL:ENZ13365.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
aspartate aminotransferase
L1_008_000M1_scaffold_2861_7
Ruminococcus sp. CAG:724, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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4494..5759
DNA (1266bp) protein (422aa)
hypothetical protein n=1 Tax=Clostridium tunisiense RepID=UPI0003030F29
Uncharacterized protein {ECO:0000313|EMBL:CCZ20661.1}; TaxID=1262966 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:724.;"
Predicted aminopeptidases
L1_008_000M1_scaffold_2861_8
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5778..6521)
DNA (744bp) protein (248aa)
Peptidase M23 n=1 Tax=Clostridium sp. CAG:226 RepID=R5BB25_9CLOT
Peptidase M23 {ECO:0000313|EMBL:CCX50032.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
peptidase M23
L1_008_000M1_scaffold_2861_9
Clostridium sp. CAG:1024, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6728..7756
DNA (1029bp) protein (343aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:1024 RepID=R5AIE3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX42653.1}; TaxID=1262770 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1024.;"
hypothetical protein
L1_008_000M1_scaffold_2861_10
BJP_IG2157_Clostridiales_52_13, Dethiosulfatibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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7737..8579
DNA (843bp) protein (281aa)
Release factor glutamine methyltransferase n=1 Tax=Clostridium sp. CAG:226 RepID=R5B9B2_9CLOT
hemK; peptide chain release factor methyltransferase
Tax=BJP_IG2157_Clostridiales_52_13
L1_008_000M1_scaffold_2861_11
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8714..9904
DNA (1191bp) protein (397aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5B6D8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX50858.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
capsule synthesis protein PGA_cap
L1_008_000M1_scaffold_2861_12
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9894..10970
DNA (1077bp) protein (359aa)
Peptide chain release factor 1 n=1 Tax=Clostridium sp. CAG:226 RepID=R5BDC9_9CLOT
Peptide chain release factor 1 {ECO:0000256|HAMAP-Rule:MF_00093}; Short=RF-1 {ECO:0000256|HAMAP-Rule:MF_00093};; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
peptide chain release factor 1
L1_008_000M1_scaffold_2861_13
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11032..12072
DNA (1041bp) protein (347aa)
Threonylcarbamoyl-AMP synthase {ECO:0000256|PIRNR:PIRNR004930}; Short=TC-AMP synthase {ECO:0000256|PIRNR:PIRNR004930};; EC=2.7.7.87 {ECO:0000256|PIRNR:PIRNR004930};; L-threonylcarbamoyladenylate synthase {ECO:0000256|PIRNR:PIRNR004930}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5BHD0_9CLOT
Sua5/YciO/YrdC/YwlC family protein
L1_008_000M1_scaffold_2861_14
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12099..12410
DNA (312bp) protein (104aa)
ribose-5-phosphate isomerase B (EC:5.3.1.6)
Sugar-phosphate isomerase RpiB/LacA/LacB family n=1 Tax=Clostridium sp. CAG:226 RepID=R5B5L0_9CLOT
Sugar-phosphate isomerase RpiB/LacA/LacB family {ECO:0000313|EMBL:CCX50855.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
Displaying 14 items

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