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L1_008_000M1_scaffold_2879

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_2879_1
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..540)
DNA (540bp) protein (180aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5B266_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX49368.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
hypothetical protein
L1_008_000M1_scaffold_2879_2
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(544..1146)
DNA (603bp) protein (201aa)
Sporulation stage III protein AG n=1 Tax=Clostridium sp. CAG:226 RepID=R5B582_9CLOT
Sporulation stage III protein AG {ECO:0000313|EMBL:CCX49369.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
sporulation stage III protein AG
L1_008_000M1_scaffold_2879_3
unknown

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comp(1180..1353)
DNA (174bp) protein (58aa)

This feature has no annotations

L1_008_000M1_scaffold_2879_4
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1368..2519)
DNA (1152bp) protein (384aa)
Stage III sporulation protein AE n=1 Tax=Clostridium sp. CAG:226 RepID=R5BD74_9CLOT
Stage III sporulation protein AE {ECO:0000313|EMBL:CCX49371.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
stage III sporulation protein AE
L1_008_000M1_scaffold_2879_5
[Clostridium] straminisolvens, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2506..2907)
DNA (402bp) protein (134aa)
Stage III sporulation protein AD n=7 Tax=Clostridium thermocellum RepID=A3DDP8_CLOTH
Stage III sporulation protein AD {ECO:0000313|EMBL:GAE87645.1}; TaxID=1294263 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] straminisolvens JCM 21531.;"
stage III sporulation protein AD
L1_008_000M1_scaffold_2879_6
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2926..3123)
DNA (198bp) protein (66aa)
Stage III sporulation protein AC n=1 Tax=Clostridium sp. CAG:226 RepID=R5B273_9CLOT
Stage III sporulation protein AC {ECO:0000313|EMBL:CCX49373.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
stage III sporulation protein AC
L1_008_000M1_scaffold_2879_7
unknown

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comp(3161..3670)
DNA (510bp) protein (170aa)
Stage III sporulation protein AB n=1 Tax=Clostridium sp. CAG:226 RepID=R5B586_9CLOT
L1_008_000M1_scaffold_2879_8
Paenibacillus sp. IHBB 10380, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(3667..4581)
DNA (915bp) protein (305aa)
Stage III sporulation protein AA n=1 Tax=Paenibacillus mucilaginosus K02 RepID=I0BHW5_9BACL
stage III sporulation protein AA
Stage III sporulation protein AA {ECO:0000313|EMBL:AJS57931.1}; TaxID=1566358 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. IHBB 10380.;"
L1_008_000M1_scaffold_2879_9
unknown

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comp(4734..5234)
DNA (501bp) protein (167aa)

This feature has no annotations

L1_008_000M1_scaffold_2879_10
BJP_IG2157_Clostridiales_52_13, Dethiosulfatibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5286..6140)
DNA (855bp) protein (285aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:138 RepID=R6AZ12_9CLOT
conserved hypothetical protein TIGR00726
Tax=BJP_IG2157_Clostridiales_52_13
L1_008_000M1_scaffold_2879_11
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6141..6596)
DNA (456bp) protein (152aa)
Transcriptional repressor NrdR n=1 Tax=Clostridium sp. CAG:226 RepID=R5B278_9CLOT
Transcriptional repressor NrdR {ECO:0000256|HAMAP-Rule:MF_00440, ECO:0000256|SAAS:SAAS00087559}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
nrdR; transcriptional repressor NrdR
L1_008_000M1_scaffold_2879_12
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6702..6944)
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5B593_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX49379.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
sporulation protein, YlmC/YmxH family
L1_008_000M1_scaffold_2879_13
Clostridium sp. CAG:1024, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7102..7275)
DNA (174bp) protein (58aa)
30S ribosomal protein S21 n=1 Tax=Clostridium sp. CAG:1024 RepID=R5ARB5_9CLOT
30S ribosomal protein S21 {ECO:0000256|HAMAP-Rule:MF_00358, ECO:0000256|RuleBase:RU000667}; TaxID=1262770 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1024.;"
30S ribosomal protein S21
L1_008_000M1_scaffold_2879_14
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7400..9079)
DNA (1680bp) protein (560aa)
MiaB-like protein tRNA modifying enzyme n=1 Tax=Clostridium sp. CAG:226 RepID=R5B9J4_9CLOT
MiaB-like protein tRNA modifying enzyme {ECO:0000313|EMBL:CCX49512.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
hypothetical protein
L1_008_000M1_scaffold_2879_15
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9090..9818)
DNA (729bp) protein (243aa)
Ribosomal RNA small subunit methyltransferase E {ECO:0000256|PIRNR:PIRNR015601}; EC=2.1.1.193 {ECO:0000256|PIRNR:PIRNR015601};; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
Ribosomal RNA small subunit methyltransferase E n=1 Tax=Clostridium sp. CAG:226 RepID=R5BDP5_9CLOT
hypothetical protein
L1_008_000M1_scaffold_2879_16
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9822..10793)
DNA (972bp) protein (324aa)
Ribosomal protein L11 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00735, ECO:0000256|SAAS:SAAS00189466}; Short=L11 Mtase {ECO:0000256|HAMAP-Rule:MF_00735};; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00735, ECO:0000256|SAAS:SAAS00189468};; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
prmA; ribosomal protein L11 methyltransferase (EC:2.1.1.-)
Ribosomal protein L11 methyltransferase n=1 Tax=Clostridium sp. CAG:226 RepID=R5B1W4_9CLOT
L1_008_000M1_scaffold_2879_17
Lachnoclostridium phytofermentans, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11009..12055
DNA (1047bp) protein (349aa)
Putative uncharacterized protein n=1 Tax=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) RepID=A9KHS3_CLOPH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABX42358.1}; TaxID=357809 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg); (Lachnoclostridium phytofermentans).;"
Displaying 17 items

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